change gather results to take input/output dir as arguments (docopt)

main/experiments/gather_results.py

+"""
+gather_results: gather OAR results from one dir to one file called gathered_results in the same directory.
+
+The result files should consist of lines and should have "stdout" in their name.
+
+Usage:
+    gather_results -i IPATH
+
+Options:
+    -h --help                   Show this screen.
+    -i --input-dir=<IPATH>      Inut directory wher to find results
+"""
+
 from os import listdir
 import os
 from os.path import isfile, join
+import docopt
 
 
 if __name__ == '__main__':
-    mypath = "/home/luc/PycharmProjects/deepFriedConvnets/main/results_global5"
+    arguments = docopt.docopt(__doc__)
+    mypath = os.path.abspath(arguments["--input-dir"])
     onlyfiles = [os.path.join(mypath, f) for f in listdir(mypath) if isfile(join(mypath, f))]
     count = 0
     results = []
     for f_name in onlyfiles:
-        if "stderr" in f_name:
+        if ".stdout" not in f_name:
             continue
         with open(f_name, "r") as f:
             str_f = f.read().strip()