Arranged code to solve compilation errors, still work to do

maca_common/include/LimitedArray.hpp

maca_common/include/LimitedStack.hpp

neural_network/src/MLPBase.cpp

trainer/src/Trainer.cpp

trainer/src/macaon_train.cpp

transition_machine/include/Config.hpp

transition_machine/src/ActionBank.cpp

transition_machine/src/Config.cpp

transition_machine/src/FeatureBank.cpp

transition_machine/src/Oracle.cpp