ContextualModule.cpp

#include "ContextualModule.hpp"

ContextualModuleImpl::ContextualModuleImpl(std::string name, const std::string & definition, std::filesystem::path path) : path(path)
{
  setName(name);

  std::regex regex("(?:(?:\\s|\\t)*)Window\\{(.*)\\}(?:(?:\\s|\\t)*)Columns\\{(.*)\\}(?:(?:\\s|\\t)*)(\\S+)\\{(.*)\\}(?:(?:\\s|\\t)*)In\\{(.*)\\}(?:(?:\\s|\\t)*)Out\\{(.*)\\}(?:(?:\\s|\\t)*)w2v\\{(.*)\\}(?:(?:\\s|\\t)*)Targets\\{(.*)\\}(?:(?:\\s|\\t)*)");
  if (!util::doIfNameMatch(regex, definition, [this,&definition](auto sm)
        {
          try
          {
            auto splited = util::split(sm.str(1), ' ');
            if (splited.size() != 2)
              util::myThrow("bad Window, expected 2 indexes");
            window = std::make_pair(std::stoi(splited[0]), std::stoi(splited[1]));

            auto funcColumns = util::split(sm.str(2), ' ');
            columns.clear();
            for (auto & funcCol : funcColumns)
            {
              functions.emplace_back() = getFunction(funcCol);
              columns.emplace_back(util::split(funcCol, ':').back());
            }

            auto subModuleType = sm.str(3);
            auto subModuleArguments = util::split(sm.str(4), ' ');

            auto options = MyModule::ModuleOptions(true)
              .bidirectional(std::stoi(subModuleArguments[0]))
              .num_layers(std::stoi(subModuleArguments[1]))
              .dropout(std::stof(subModuleArguments[2]))
              .complete(std::stoi(subModuleArguments[3]));

            for (auto & target : util::split(sm.str(8), ' '))
            {
              auto splited = util::split(target, '.');
              if (splited.size() != 2 and splited.size() != 3)
                util::myThrow(fmt::format("invalid target '{}' expected 'object.index(.childIndex)'", target));
              targets.emplace_back(std::make_tuple(Config::str2object(splited[0]), std::stoi(splited[1]), splited.size() == 3 ? std::optional<int>(std::stoi(splited[2])) : std::optional<int>()));
            }

            inSize = std::stoi(sm.str(5));
            outSize = std::stoi(sm.str(6));
            if (outSize % 2)
              util::myThrow("odd out size is not supported");

            if (subModuleType == "LSTM")
              myModule = register_module("myModule", LSTM(columns.size()*inSize, outSize, options));
            else if (subModuleType == "GRU")
              myModule = register_module("myModule", GRU(columns.size()*inSize, outSize, options));
            else if (subModuleType == "Concat")
              myModule = register_module("myModule", Concat(inSize));
            else
              util::myThrow(fmt::format("unknown sumodule type '{}'", subModuleType));

            w2vFiles = sm.str(7);

            if (!w2vFiles.empty())
            {
              auto pathes = util::split(w2vFiles.string(), ' ');
              for (auto & p : pathes)
              {
                auto splited = util::split(p, ',');
                if (splited.size() != 2)
                  util::myThrow("expected 'prefix,file.w2v'");
                getDict().loadWord2Vec(this->path / splited[1], splited[0]);
                getDict().setState(Dict::State::Closed);
                dictSetPretrained(true);
              }
            }

          } catch (std::exception & e) {util::myThrow(fmt::format("{} in '{}'",e.what(),definition));}
        }))
    util::myThrow(fmt::format("invalid definition '{}'", definition));
}

std::size_t ContextualModuleImpl::getOutputSize()
{
  return targets.size()*outSize;
}

std::size_t ContextualModuleImpl::getInputSize()
{
  return columns.size()*(2+window.second-window.first)+targets.size();
}

void ContextualModuleImpl::addToContext(std::vector<std::vector<long>> & context, const Config & config)
{
  auto & dict = getDict();
  std::vector<long> contextIndexes;
  std::vector<long> targetIndexes;
  std::map<long,long> configIndex2ContextIndex;

  contextIndexes.emplace_back(-2);

  for (long i = window.first; i <= window.second; i++)
  {
    if (config.hasRelativeWordIndex(Config::Object::Buffer, i))
    {
      contextIndexes.emplace_back(config.getRelativeWordIndex(Config::Object::Buffer, i));
      configIndex2ContextIndex[contextIndexes.back()] = contextIndexes.size()-1;
    }
    else
      contextIndexes.emplace_back(-1);
  }

  for (auto & target : targets)
    if (config.hasRelativeWordIndex(std::get<0>(target), std::get<1>(target)))
    {
      int baseIndex = config.getRelativeWordIndex(std::get<0>(target), std::get<1>(target));
      if (!std::get<2>(target))
        targetIndexes.emplace_back(baseIndex);
      else
      {
        int childIndex = *std::get<2>(target);
        auto childs = util::split(config.getAsFeature(Config::childsColName, baseIndex).get(), '|');
        int candidate = -1;

        if (childIndex >= 0 and childIndex < (int)childs.size())
          candidate = std::stoi(childs[childIndex]);
        else if (childIndex < 0 and ((int)childs.size())+childIndex >= 0)
          candidate = std::stoi(childs[childs.size()+childIndex]);

        targetIndexes.emplace_back(candidate);
      }
    }
    else
      targetIndexes.emplace_back(-1);

  for (auto index : contextIndexes)
    for (unsigned int colIndex = 0; colIndex < columns.size(); colIndex++)
    {
      auto & col = columns[colIndex];
      if (index == -1)
      {
        for (auto & contextElement : context)
          contextElement.push_back(dict.getIndexOrInsert(Dict::nullValueStr, col));
      }
      else if (index == -2)
      {
        //TODO maybe change this to a unique value like Dict::noneValueStr
        for (auto & contextElement : context)
          contextElement.push_back(dict.getIndexOrInsert(Dict::nullValueStr, col));
      }
      else
      {
        int dictIndex;
        if (col == Config::idColName)
        {
          std::string value;
          if (config.isCommentPredicted(index))
            value = "comment";
          else if (config.isMultiwordPredicted(index))
            value = "multiword";
          else if (config.isTokenPredicted(index))
            value = "token";
          dictIndex = dict.getIndexOrInsert(value, col);
        }
        else
        {
          std::string featureValue = config.getAsFeature(col, index);
          dictIndex = dict.getIndexOrInsert(functions[colIndex](featureValue), col);
        }

        for (auto & contextElement : context)
          contextElement.push_back(dictIndex);
      }
    }

  for (auto index : targetIndexes)
  {
    if (configIndex2ContextIndex.count(index))
    {
      for (auto & contextElement : context)
        contextElement.push_back(configIndex2ContextIndex.at(index));
    }
    else
    {
      for (auto & contextElement : context)
        contextElement.push_back(0);
    }
  }
}

torch::Tensor batchedIndexSelect(torch::Tensor input, int dim, torch::Tensor index)
{
  for (int i = 1; i < input.dim(); i++)
    if (i != dim)
      index = index.unsqueeze(i);

  std::vector<long> expanse(input.dim());
  for (unsigned int i = 1; i < expanse.size(); i++)
    expanse[i] = input.size(i);
  expanse[0] = -1;
  expanse[dim] = -1;
  index = index.expand(expanse);

  return torch::gather(input, dim, index);
}

torch::Tensor ContextualModuleImpl::forward(torch::Tensor input)
{
  auto context = wordEmbeddings(input.narrow(1, firstInputIndex, getInputSize()-targets.size())).view({input.size(0), (2+window.second-window.first), -1});
  auto focusedIndexes = input.narrow(1, firstInputIndex+getInputSize()-targets.size(), targets.size());

  auto out = myModule->forward(context);

  return batchedIndexSelect(out, 1, focusedIndexes).view({input.size(0), -1});
}

void ContextualModuleImpl::registerEmbeddings()
{
  wordEmbeddings = register_module("embeddings", torch::nn::Embedding(torch::nn::EmbeddingOptions(getDict().size(), inSize)));

  auto pathes = util::split(w2vFiles.string(), ' ');
  for (auto & p : pathes)
  {
    auto splited = util::split(p, ',');
    loadPretrainedW2vEmbeddings(wordEmbeddings, path / splited[1], splited[0]);
  }
}