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Commit 7acce0c9 authored by bbauvin's avatar bbauvin
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Fixed issue in getmultiviewdb

parent 5cc292b0
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......@@ -569,9 +569,9 @@ def getModifiedMultiOmicDBcsv(features, path, name, NB_CLASS, LABELS_NAMES):
patientMatrix = np.zeros((sortedRNASeqGeneIndices.shape[1], nbBins), dtype=np.uint8)
for lineIndex, geneIndex in enumerate(patientSortedArray):
patientMatrix[geneIndex]= sortedBinsMatrix[lineIndex,:]
brnaseqDset[patientIndex] = patientMatrix.flatten()
brnaseqDset.attrs["name"] = "bRNASeq"
brnaseqDset.attrs["sparse"] = False
binnedRNASeq[patientIndex] = patientMatrix.flatten()
binnedRNASeq.attrs["name"] = "bRNASeq"
binnedRNASeq.attrs["sparse"] = False
logging.debug("Done:\t Getting Binned RNASeq Data")
# logging.debug("Start:\t Getting Adjacence RNASeq Data")
......
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