diff --git a/README.md b/README.md index cc06fb56f091b9f531159b15965d758836802e06..c9207d4b3437f387b9d8234f1d1907dde5913064 100644 --- a/README.md +++ b/README.md @@ -1,20 +1,20 @@ # Code, Models & Data Repository ## *μPIX : Leveraging Generative AI for Enhanced, Personalized and Sustainable Microscopy* -Preprint BioRXiv [](https://doi.org/10.1101/2024.10.25.620201) #### Gabriel Bon, Daniel Sapede, Cédric Matthews, and Fabrice Daian +Preprint BioRXiv [](https://doi.org/10.1101/2024.10.25.620201) ##### <u>Dataset & pre-trained µPIX Models</u> | | Dataset | pre-trained µPIX Models | |--------------------------|--------------------------------------------------------------------------------------------------------------------------------|--------------------------------------------------------------------------------------------------------------------------------| -| CSBDeep | [download](https://sync.lis-lab.fr/index.php/s/sy3SrGgqNafbP5X/download) | [download](https://sync.lis-lab.fr/index.php/s/9SxkR2QH3Z79Bbc/download) | -| Gastruloids | [download](https://sync.lis-lab.fr/index.php/s/kDyLKjCt48BfNMK/download) | [download](https://sync.lis-lab.fr/index.php/s/n2oJAw4LobTCeNZ/download) | -| Metrology | [download](https://sync.lis-lab.fr/index.php/s/mYDRTeAQxMxNPPJ/download) | [download](https://sync.lis-lab.fr/index.php/s/degZsCxN7ZXxeB6/download) | +| ```csbdeep``` | [download](https://sync.lis-lab.fr/index.php/s/sy3SrGgqNafbP5X/download) | [download](https://sync.lis-lab.fr/index.php/s/9SxkR2QH3Z79Bbc/download) | +| ```gastruloids``` | [download](https://sync.lis-lab.fr/index.php/s/kDyLKjCt48BfNMK/download) | [download](https://sync.lis-lab.fr/index.php/s/n2oJAw4LobTCeNZ/download) | +| ```metrology``` | [download](https://sync.lis-lab.fr/index.php/s/mYDRTeAQxMxNPPJ/download) | [download](https://sync.lis-lab.fr/index.php/s/degZsCxN7ZXxeB6/download) | ##### <u>Demo Notebooks</u> -* Use a pre-trained µPIX model to denoise images (metrology dataset) [](https://colab.research.google.com/drive/1EbV04iv141q7ebVUOErJupYboaCV40OD?usp=drive_link) +* Use a pre-trained µPIX model to denoise images (```metrology``` dataset) [](https://colab.research.google.com/drive/1EbV04iv141q7ebVUOErJupYboaCV40OD?usp=drive_link) * Train a µPIX model from scratch (metrology dataset)