diff --git a/lmt-analysis/.gitlab-ci.yml b/.gitlab-ci.yml similarity index 100% rename from lmt-analysis/.gitlab-ci.yml rename to .gitlab-ci.yml diff --git a/lmt-analysis/LMT/EMT_notebooks/Add_markers.ipynb b/EMT/EMT_notebooks/Add_markers.ipynb similarity index 100% rename from lmt-analysis/LMT/EMT_notebooks/Add_markers.ipynb rename to EMT/EMT_notebooks/Add_markers.ipynb diff --git a/lmt-analysis/LMT/EMT_notebooks/Add_markers_social_range.ipynb b/EMT/EMT_notebooks/Add_markers_social_range.ipynb similarity index 100% rename from lmt-analysis/LMT/EMT_notebooks/Add_markers_social_range.ipynb rename to EMT/EMT_notebooks/Add_markers_social_range.ipynb diff --git a/lmt-analysis/LMT/EMT_notebooks/Add_markers_speed.ipynb b/EMT/EMT_notebooks/Add_markers_speed.ipynb similarity index 100% rename from lmt-analysis/LMT/EMT_notebooks/Add_markers_speed.ipynb rename to EMT/EMT_notebooks/Add_markers_speed.ipynb diff --git a/lmt-analysis/LMT/EMT_notebooks/Compare_merge_methods.ipynb 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b/EMT/EMT_scripts/Post_process_events_script.py similarity index 100% rename from lmt-analysis/LMT/EMT_scripts/Post_process_events_script.py rename to EMT/EMT_scripts/Post_process_events_script.py diff --git a/lmt-analysis/LMT/EMT_scripts/Rebuild_All_Events_LMT_script.py b/EMT/EMT_scripts/Rebuild_All_Events_LMT_script.py similarity index 100% rename from lmt-analysis/LMT/EMT_scripts/Rebuild_All_Events_LMT_script.py rename to EMT/EMT_scripts/Rebuild_All_Events_LMT_script.py diff --git a/lmt-analysis/LMT/EMT_scripts/Rebuild_Contacts_Biberon_Mangeoire_Objets_script.py b/EMT/EMT_scripts/Rebuild_Contacts_Biberon_Mangeoire_Objets_script.py similarity index 100% rename from lmt-analysis/LMT/EMT_scripts/Rebuild_Contacts_Biberon_Mangeoire_Objets_script.py rename to EMT/EMT_scripts/Rebuild_Contacts_Biberon_Mangeoire_Objets_script.py diff --git a/lmt-analysis/LMT/EMT_scripts/Rebuild_Huddling_events_script.py b/EMT/EMT_scripts/Rebuild_Huddling_events_script.py similarity index 100% rename from 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a/lmt-analysis/LMT/lmtanalysis/BuildEventNest4.py b/EMT/lmtanalysis/BuildEventNest4.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventNest4.py rename to EMT/lmtanalysis/BuildEventNest4.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventNight.py b/EMT/lmtanalysis/BuildEventNight.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventNight.py rename to EMT/lmtanalysis/BuildEventNight.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNor.py b/EMT/lmtanalysis/BuildEventObjectSniffingNor.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNor.py rename to EMT/lmtanalysis/BuildEventObjectSniffingNor.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNorAcquisitionWithConfig.py b/EMT/lmtanalysis/BuildEventObjectSniffingNorAcquisitionWithConfig.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNorAcquisitionWithConfig.py rename to EMT/lmtanalysis/BuildEventObjectSniffingNorAcquisitionWithConfig.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNorTestWithConfig.py b/EMT/lmtanalysis/BuildEventObjectSniffingNorTestWithConfig.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventObjectSniffingNorTestWithConfig.py rename to EMT/lmtanalysis/BuildEventObjectSniffingNorTestWithConfig.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventOnHouse.py b/EMT/lmtanalysis/BuildEventOnHouse.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventOnHouse.py rename to EMT/lmtanalysis/BuildEventOnHouse.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventOralGenitalContact.py b/EMT/lmtanalysis/BuildEventOralGenitalContact.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventOralGenitalContact.py rename to EMT/lmtanalysis/BuildEventOralGenitalContact.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventOralOralContact.py b/EMT/lmtanalysis/BuildEventOralOralContact.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventOralOralContact.py rename to EMT/lmtanalysis/BuildEventOralOralContact.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventOralSideSequence.py b/EMT/lmtanalysis/BuildEventOralSideSequence.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventOralSideSequence.py rename to EMT/lmtanalysis/BuildEventOralSideSequence.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventOtherContact.py b/EMT/lmtanalysis/BuildEventOtherContact.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventOtherContact.py rename to EMT/lmtanalysis/BuildEventOtherContact.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventPassiveAnogenitalSniff.py b/EMT/lmtanalysis/BuildEventPassiveAnogenitalSniff.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventPassiveAnogenitalSniff.py rename to EMT/lmtanalysis/BuildEventPassiveAnogenitalSniff.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventRear5.py b/EMT/lmtanalysis/BuildEventRear5.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventRear5.py rename to EMT/lmtanalysis/BuildEventRear5.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventRearCenterPeriphery.py b/EMT/lmtanalysis/BuildEventRearCenterPeriphery.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventRearCenterPeriphery.py rename to EMT/lmtanalysis/BuildEventRearCenterPeriphery.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSAP.py b/EMT/lmtanalysis/BuildEventSAP.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSAP.py rename to EMT/lmtanalysis/BuildEventSAP.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSAP_oldv.py b/EMT/lmtanalysis/BuildEventSAP_oldv.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSAP_oldv.py rename to EMT/lmtanalysis/BuildEventSAP_oldv.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSideBySide.py b/EMT/lmtanalysis/BuildEventSideBySide.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSideBySide.py rename to EMT/lmtanalysis/BuildEventSideBySide.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSideBySideOpposite.py b/EMT/lmtanalysis/BuildEventSideBySideOpposite.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSideBySideOpposite.py rename to EMT/lmtanalysis/BuildEventSideBySideOpposite.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSideWalk.py b/EMT/lmtanalysis/BuildEventSideWalk.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSideWalk.py rename to EMT/lmtanalysis/BuildEventSideWalk.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSocialApproach.py b/EMT/lmtanalysis/BuildEventSocialApproach.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSocialApproach.py rename to EMT/lmtanalysis/BuildEventSocialApproach.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventSocialEscape.py b/EMT/lmtanalysis/BuildEventSocialEscape.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventSocialEscape.py rename to EMT/lmtanalysis/BuildEventSocialEscape.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventStop.py b/EMT/lmtanalysis/BuildEventStop.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventStop.py rename to EMT/lmtanalysis/BuildEventStop.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventTrain2.py b/EMT/lmtanalysis/BuildEventTrain2.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventTrain2.py rename to EMT/lmtanalysis/BuildEventTrain2.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventTrain3.py b/EMT/lmtanalysis/BuildEventTrain3.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventTrain3.py rename to EMT/lmtanalysis/BuildEventTrain3.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventTrain4.py b/EMT/lmtanalysis/BuildEventTrain4.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventTrain4.py rename to EMT/lmtanalysis/BuildEventTrain4.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventWallJump.py b/EMT/lmtanalysis/BuildEventWallJump.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventWallJump.py rename to EMT/lmtanalysis/BuildEventWallJump.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventWallJump_oldv.py b/EMT/lmtanalysis/BuildEventWallJump_oldv.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventWallJump_oldv.py rename to EMT/lmtanalysis/BuildEventWallJump_oldv.py diff --git a/lmt-analysis/LMT/lmtanalysis/BuildEventWaterPoint.py b/EMT/lmtanalysis/BuildEventWaterPoint.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/BuildEventWaterPoint.py rename to EMT/lmtanalysis/BuildEventWaterPoint.py diff --git a/lmt-analysis/LMT/lmtanalysis/CheckWrongAnimal.py b/EMT/lmtanalysis/CheckWrongAnimal.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/CheckWrongAnimal.py rename to EMT/lmtanalysis/CheckWrongAnimal.py diff --git a/lmt-analysis/LMT/lmtanalysis/Chronometer.py b/EMT/lmtanalysis/Chronometer.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Chronometer.py rename to EMT/lmtanalysis/Chronometer.py diff --git a/lmt-analysis/LMT/lmtanalysis/CorrectDetectionIntegrity.py b/EMT/lmtanalysis/CorrectDetectionIntegrity.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/CorrectDetectionIntegrity.py rename to EMT/lmtanalysis/CorrectDetectionIntegrity.py diff --git a/lmt-analysis/LMT/lmtanalysis/Detection.py b/EMT/lmtanalysis/Detection.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Detection.py rename to EMT/lmtanalysis/Detection.py diff --git a/lmt-analysis/LMT/lmtanalysis/Event.py b/EMT/lmtanalysis/Event.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Event.py rename to EMT/lmtanalysis/Event.py diff --git a/lmt-analysis/LMT/lmtanalysis/EventTimeLineCache.py b/EMT/lmtanalysis/EventTimeLineCache.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/EventTimeLineCache.py rename to EMT/lmtanalysis/EventTimeLineCache.py diff --git a/lmt-analysis/LMT/lmtanalysis/FileUtil.py b/EMT/lmtanalysis/FileUtil.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/FileUtil.py rename to EMT/lmtanalysis/FileUtil.py diff --git a/lmt-analysis/LMT/lmtanalysis/Mask.py b/EMT/lmtanalysis/Mask.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Mask.py rename to EMT/lmtanalysis/Mask.py diff --git a/lmt-analysis/LMT/lmtanalysis/Measure.py b/EMT/lmtanalysis/Measure.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Measure.py rename to EMT/lmtanalysis/Measure.py diff --git a/lmt-analysis/LMT/lmtanalysis/MeasureOld.py b/EMT/lmtanalysis/MeasureOld.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/MeasureOld.py rename to EMT/lmtanalysis/MeasureOld.py diff --git a/lmt-analysis/LMT/lmtanalysis/Parameters.py b/EMT/lmtanalysis/Parameters.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Parameters.py rename to EMT/lmtanalysis/Parameters.py diff --git a/lmt-analysis/LMT/lmtanalysis/ParametersMouse.py b/EMT/lmtanalysis/ParametersMouse.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/ParametersMouse.py rename to EMT/lmtanalysis/ParametersMouse.py diff --git a/lmt-analysis/LMT/lmtanalysis/ParametersRat.py b/EMT/lmtanalysis/ParametersRat.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/ParametersRat.py rename to EMT/lmtanalysis/ParametersRat.py diff --git a/lmt-analysis/LMT/lmtanalysis/Point.py b/EMT/lmtanalysis/Point.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Point.py rename to EMT/lmtanalysis/Point.py diff --git a/lmt-analysis/LMT/lmtanalysis/Rectangle.py b/EMT/lmtanalysis/Rectangle.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Rectangle.py rename to EMT/lmtanalysis/Rectangle.py diff --git a/lmt-analysis/LMT/lmtanalysis/Settings.py b/EMT/lmtanalysis/Settings.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Settings.py rename to EMT/lmtanalysis/Settings.py diff --git a/lmt-analysis/LMT/lmtanalysis/TaskLogger.py b/EMT/lmtanalysis/TaskLogger.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/TaskLogger.py rename to EMT/lmtanalysis/TaskLogger.py diff --git a/lmt-analysis/LMT/lmtanalysis/Util.py b/EMT/lmtanalysis/Util.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/Util.py rename to EMT/lmtanalysis/Util.py diff --git a/lmt-analysis/LMT/lmtanalysis/__init__.py b/EMT/lmtanalysis/__init__.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/__init__.py rename to EMT/lmtanalysis/__init__.py diff --git a/lmt-analysis/LMT/lmtanalysis/split_database.py b/EMT/lmtanalysis/split_database.py similarity index 100% rename from lmt-analysis/LMT/lmtanalysis/split_database.py rename to EMT/lmtanalysis/split_database.py diff --git a/lmt-analysis/LMT/scripts/AddFileInfo.py b/EMT/scripts/AddFileInfo.py similarity index 100% rename from lmt-analysis/LMT/scripts/AddFileInfo.py rename to EMT/scripts/AddFileInfo.py diff --git a/lmt-analysis/LMT/scripts/AlterColBase.py b/EMT/scripts/AlterColBase.py similarity index 100% rename from lmt-analysis/LMT/scripts/AlterColBase.py rename to EMT/scripts/AlterColBase.py diff --git a/lmt-analysis/LMT/scripts/AutoNightInput.ipynb b/EMT/scripts/AutoNightInput.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/AutoNightInput.ipynb rename to EMT/scripts/AutoNightInput.ipynb diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/BehaviouralSequences.iml b/EMT/scripts/BehaviouralSequences/.idea/BehaviouralSequences.iml similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/BehaviouralSequences.iml rename to EMT/scripts/BehaviouralSequences/.idea/BehaviouralSequences.iml diff --git a/lmt-analysis/.idea/inspectionProfiles/profiles_settings.xml b/EMT/scripts/BehaviouralSequences/.idea/inspectionProfiles/profiles_settings.xml similarity index 100% rename from lmt-analysis/.idea/inspectionProfiles/profiles_settings.xml rename to EMT/scripts/BehaviouralSequences/.idea/inspectionProfiles/profiles_settings.xml diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/modules.xml b/EMT/scripts/BehaviouralSequences/.idea/modules.xml similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/modules.xml rename to EMT/scripts/BehaviouralSequences/.idea/modules.xml diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/workspace.xml b/EMT/scripts/BehaviouralSequences/.idea/workspace.xml similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/workspace.xml rename to EMT/scripts/BehaviouralSequences/.idea/workspace.xml diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/CheckEventsForSequences.py b/EMT/scripts/BehaviouralSequences/CheckEventsForSequences.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/CheckEventsForSequences.py rename to EMT/scripts/BehaviouralSequences/CheckEventsForSequences.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/CompareProfileInitialExclusiveEvents.py b/EMT/scripts/BehaviouralSequences/CompareProfileInitialExclusiveEvents.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/CompareProfileInitialExclusiveEvents.py rename to EMT/scripts/BehaviouralSequences/CompareProfileInitialExclusiveEvents.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/ComputeTransitionsBetweenEvents.py b/EMT/scripts/BehaviouralSequences/ComputeTransitionsBetweenEvents.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/ComputeTransitionsBetweenEvents.py rename to EMT/scripts/BehaviouralSequences/ComputeTransitionsBetweenEvents.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/ExclusivePattern.py b/EMT/scripts/BehaviouralSequences/ExclusivePattern.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/ExclusivePattern.py rename to EMT/scripts/BehaviouralSequences/ExclusivePattern.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/ExtractEventTableFromDatabase.py b/EMT/scripts/BehaviouralSequences/ExtractEventTableFromDatabase.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/ExtractEventTableFromDatabase.py rename to EMT/scripts/BehaviouralSequences/ExtractEventTableFromDatabase.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/__init__.py b/EMT/scripts/BehaviouralSequences/__init__.py similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/__init__.py rename to EMT/scripts/BehaviouralSequences/__init__.py diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/mygraph.html b/EMT/scripts/BehaviouralSequences/mygraph.html similarity index 100% rename from lmt-analysis/LMT/scripts/BehaviouralSequences/mygraph.html rename to EMT/scripts/BehaviouralSequences/mygraph.html diff --git a/lmt-analysis/LMT/scripts/BuildDataBaseIndex.py b/EMT/scripts/BuildDataBaseIndex.py similarity index 100% rename from lmt-analysis/LMT/scripts/BuildDataBaseIndex.py rename to EMT/scripts/BuildDataBaseIndex.py diff --git a/lmt-analysis/LMT/scripts/Check_Experiment_Reliability.py b/EMT/scripts/Check_Experiment_Reliability.py similarity index 100% rename from lmt-analysis/LMT/scripts/Check_Experiment_Reliability.py rename to EMT/scripts/Check_Experiment_Reliability.py diff --git a/lmt-analysis/LMT/scripts/ComputeMeanSpeedPerEvent.py b/EMT/scripts/ComputeMeanSpeedPerEvent.py similarity index 100% rename from lmt-analysis/LMT/scripts/ComputeMeanSpeedPerEvent.py rename to EMT/scripts/ComputeMeanSpeedPerEvent.py diff --git a/lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAuto.ipynb b/EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAuto.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAuto.ipynb rename to EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAuto.ipynb diff --git a/lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomatic.py b/EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomatic.py similarity index 100% rename from lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomatic.py rename to EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomatic.py diff --git a/lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomaticPerIndividual.py b/EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomaticPerIndividual.py similarity index 100% rename from lmt-analysis/LMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomaticPerIndividual.py rename to EMT/scripts/ComputeMeasuresIdentityProfileOneMouseAutomaticPerIndividual.py diff --git a/lmt-analysis/LMT/scripts/Compute_Contact_Out_Of_Nest_Zone.py b/EMT/scripts/Compute_Contact_Out_Of_Nest_Zone.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Contact_Out_Of_Nest_Zone.py rename to EMT/scripts/Compute_Contact_Out_Of_Nest_Zone.py diff --git a/lmt-analysis/LMT/scripts/Compute_Distance_Lg_Term_Timebin.py b/EMT/scripts/Compute_Distance_Lg_Term_Timebin.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Distance_Lg_Term_Timebin.py rename to EMT/scripts/Compute_Distance_Lg_Term_Timebin.py diff --git a/lmt-analysis/LMT/scripts/Compute_Event_Duration_Distribution.py b/EMT/scripts/Compute_Event_Duration_Distribution.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Event_Duration_Distribution.py rename to EMT/scripts/Compute_Event_Duration_Distribution.py diff --git a/lmt-analysis/LMT/scripts/Compute_Individual_Profiles_Mixed_Genotypes.py b/EMT/scripts/Compute_Individual_Profiles_Mixed_Genotypes.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Individual_Profiles_Mixed_Genotypes.py rename to EMT/scripts/Compute_Individual_Profiles_Mixed_Genotypes.py diff --git a/lmt-analysis/LMT/scripts/Compute_Link_Make_Break_Group3.py b/EMT/scripts/Compute_Link_Make_Break_Group3.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Link_Make_Break_Group3.py rename to EMT/scripts/Compute_Link_Make_Break_Group3.py diff --git a/lmt-analysis/LMT/scripts/Compute_Link_Make_Break_Group4.py b/EMT/scripts/Compute_Link_Make_Break_Group4.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Link_Make_Break_Group4.py rename to EMT/scripts/Compute_Link_Make_Break_Group4.py diff --git a/lmt-analysis/LMT/scripts/Compute_Make_Break_Group3.py b/EMT/scripts/Compute_Make_Break_Group3.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Make_Break_Group3.py rename to EMT/scripts/Compute_Make_Break_Group3.py diff --git a/lmt-analysis/LMT/scripts/Compute_Make_Break_Group4.py b/EMT/scripts/Compute_Make_Break_Group4.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Make_Break_Group4.py rename to EMT/scripts/Compute_Make_Break_Group4.py diff --git a/lmt-analysis/LMT/scripts/Compute_Manual_Validation.py b/EMT/scripts/Compute_Manual_Validation.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Manual_Validation.py rename to EMT/scripts/Compute_Manual_Validation.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile.py b/EMT/scripts/Compute_Measures_Identity_Profile.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile.py rename to EMT/scripts/Compute_Measures_Identity_Profile.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Dyadic.py b/EMT/scripts/Compute_Measures_Identity_Profile_Dyadic.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Dyadic.py rename to EMT/scripts/Compute_Measures_Identity_Profile_Dyadic.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Mixed_Geno_Groups.py b/EMT/scripts/Compute_Measures_Identity_Profile_Mixed_Geno_Groups.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Mixed_Geno_Groups.py rename to EMT/scripts/Compute_Measures_Identity_Profile_Mixed_Geno_Groups.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_OneMouse.py b/EMT/scripts/Compute_Measures_Identity_Profile_OneMouse.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_OneMouse.py rename to EMT/scripts/Compute_Measures_Identity_Profile_OneMouse.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_OneMouse_During_Night.py b/EMT/scripts/Compute_Measures_Identity_Profile_OneMouse_During_Night.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_OneMouse_During_Night.py rename to EMT/scripts/Compute_Measures_Identity_Profile_OneMouse_During_Night.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Pairs.py b/EMT/scripts/Compute_Measures_Identity_Profile_Pairs.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Pairs.py rename to EMT/scripts/Compute_Measures_Identity_Profile_Pairs.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Single_Object_Explo.py b/EMT/scripts/Compute_Measures_Identity_Profile_Single_Object_Explo.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Single_Object_Explo.py rename to EMT/scripts/Compute_Measures_Identity_Profile_Single_Object_Explo.py diff --git a/lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Social_Recognition.py b/EMT/scripts/Compute_Measures_Identity_Profile_Social_Recognition.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Measures_Identity_Profile_Social_Recognition.py rename to EMT/scripts/Compute_Measures_Identity_Profile_Social_Recognition.py diff --git a/lmt-analysis/LMT/scripts/Compute_OnHouseStats.py b/EMT/scripts/Compute_OnHouseStats.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_OnHouseStats.py rename to EMT/scripts/Compute_OnHouseStats.py diff --git a/lmt-analysis/LMT/scripts/Compute_OnHouseTimelines.py b/EMT/scripts/Compute_OnHouseTimelines.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_OnHouseTimelines.py rename to EMT/scripts/Compute_OnHouseTimelines.py diff --git a/lmt-analysis/LMT/scripts/Compute_Proportions_Group3.py b/EMT/scripts/Compute_Proportions_Group3.py similarity index 100% rename from lmt-analysis/LMT/scripts/Compute_Proportions_Group3.py rename to EMT/scripts/Compute_Proportions_Group3.py diff --git a/lmt-analysis/LMT/scripts/ExportAnimalListFromJsonResultFile.py b/EMT/scripts/ExportAnimalListFromJsonResultFile.py similarity index 100% rename from lmt-analysis/LMT/scripts/ExportAnimalListFromJsonResultFile.py rename to EMT/scripts/ExportAnimalListFromJsonResultFile.py diff --git a/lmt-analysis/LMT/scripts/ExportResultsDyadicToCSV.py b/EMT/scripts/ExportResultsDyadicToCSV.py similarity index 100% rename from lmt-analysis/LMT/scripts/ExportResultsDyadicToCSV.py rename to EMT/scripts/ExportResultsDyadicToCSV.py diff --git a/lmt-analysis/LMT/scripts/ExportResultsOpenField.py b/EMT/scripts/ExportResultsOpenField.py similarity index 100% rename from lmt-analysis/LMT/scripts/ExportResultsOpenField.py rename to EMT/scripts/ExportResultsOpenField.py diff --git a/lmt-analysis/LMT/scripts/ExportResultsToCSV.py b/EMT/scripts/ExportResultsToCSV.py similarity index 100% rename from lmt-analysis/LMT/scripts/ExportResultsToCSV.py rename to EMT/scripts/ExportResultsToCSV.py diff --git a/lmt-analysis/LMT/scripts/Inter animal interaction matrix.py b/EMT/scripts/Inter animal interaction matrix.py similarity index 100% rename from lmt-analysis/LMT/scripts/Inter animal interaction matrix.py rename to EMT/scripts/Inter animal interaction matrix.py diff --git a/lmt-analysis/LMT/scripts/ManualNightInput.ipynb b/EMT/scripts/ManualNightInput.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/ManualNightInput.ipynb rename to EMT/scripts/ManualNightInput.ipynb diff --git a/lmt-analysis/LMT/scripts/ManualNightInput.py b/EMT/scripts/ManualNightInput.py similarity index 100% rename from lmt-analysis/LMT/scripts/ManualNightInput.py rename to EMT/scripts/ManualNightInput.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorOpenfield.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorOpenfield.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorOpenfield.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorOpenfield.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTest.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTest.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTest.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTest.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTestRedCage.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTestRedCage.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTestRedCage.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTestRedCage.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysis.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysis.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysis.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysis.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisGenotypeComparison.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisGenotypeComparison.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisGenotypeComparison.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisGenotypeComparison.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisObjectComparisons.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisObjectComparisons.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisObjectComparisons.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeNORAnalysisObjectComparisons.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognition.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognition.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognition.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognition.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognitionNorRedCage.py b/EMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognitionNorRedCage.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognitionNorRedCage.py rename to EMT/scripts/Novel_Object_Recognition_Test/ComputeObjectRecognitionNorRedCage.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ConfigurationNOR.py b/EMT/scripts/Novel_Object_Recognition_Test/ConfigurationNOR.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/ConfigurationNOR.py rename to EMT/scripts/Novel_Object_Recognition_Test/ConfigurationNOR.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/checkObjectPreference.py b/EMT/scripts/Novel_Object_Recognition_Test/checkObjectPreference.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/checkObjectPreference.py rename to EMT/scripts/Novel_Object_Recognition_Test/checkObjectPreference.py diff --git a/lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/computeManualScoringNOR.py b/EMT/scripts/Novel_Object_Recognition_Test/computeManualScoringNOR.py similarity index 100% rename from lmt-analysis/LMT/scripts/Novel_Object_Recognition_Test/computeManualScoringNOR.py rename to EMT/scripts/Novel_Object_Recognition_Test/computeManualScoringNOR.py diff --git a/lmt-analysis/LMT/scripts/Plot Heat Map.ipynb b/EMT/scripts/Plot Heat Map.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/Plot Heat Map.ipynb rename to EMT/scripts/Plot Heat Map.ipynb diff --git a/lmt-analysis/LMT/scripts/PlotFigurePairsBothSexes.py b/EMT/scripts/PlotFigurePairsBothSexes.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotFigurePairsBothSexes.py rename to EMT/scripts/PlotFigurePairsBothSexes.py diff --git a/lmt-analysis/LMT/scripts/PlotFigureProfilesAuto.py b/EMT/scripts/PlotFigureProfilesAuto.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotFigureProfilesAuto.py rename to EMT/scripts/PlotFigureProfilesAuto.py diff --git a/lmt-analysis/LMT/scripts/PlotSensorData.py b/EMT/scripts/PlotSensorData.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotSensorData.py rename to EMT/scripts/PlotSensorData.py diff --git a/lmt-analysis/LMT/scripts/PlotTimeLineActivity.py b/EMT/scripts/PlotTimeLineActivity.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotTimeLineActivity.py rename to EMT/scripts/PlotTimeLineActivity.py diff --git a/lmt-analysis/LMT/scripts/PlotTimeLineActivityAutomatic.ipynb b/EMT/scripts/PlotTimeLineActivityAutomatic.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/PlotTimeLineActivityAutomatic.ipynb rename to EMT/scripts/PlotTimeLineActivityAutomatic.ipynb diff --git a/lmt-analysis/LMT/scripts/PlotTimeLineActivityAutomatic.py b/EMT/scripts/PlotTimeLineActivityAutomatic.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotTimeLineActivityAutomatic.py rename to EMT/scripts/PlotTimeLineActivityAutomatic.py diff --git a/lmt-analysis/LMT/scripts/PlotTimeLineCumulativeWaterPoint.py b/EMT/scripts/PlotTimeLineCumulativeWaterPoint.py similarity index 100% rename from lmt-analysis/LMT/scripts/PlotTimeLineCumulativeWaterPoint.py rename to EMT/scripts/PlotTimeLineCumulativeWaterPoint.py diff --git a/lmt-analysis/LMT/scripts/Plot_Activity_Interlab_Study_First_4h.py b/EMT/scripts/Plot_Activity_Interlab_Study_First_4h.py similarity index 100% rename from lmt-analysis/LMT/scripts/Plot_Activity_Interlab_Study_First_4h.py rename to EMT/scripts/Plot_Activity_Interlab_Study_First_4h.py diff --git a/lmt-analysis/LMT/scripts/Plot_Figure_Activity_NOR_habituation_group_monitoring.py b/EMT/scripts/Plot_Figure_Activity_NOR_habituation_group_monitoring.py similarity index 100% rename from lmt-analysis/LMT/scripts/Plot_Figure_Activity_NOR_habituation_group_monitoring.py rename to EMT/scripts/Plot_Figure_Activity_NOR_habituation_group_monitoring.py diff --git a/lmt-analysis/LMT/scripts/Plot_Trajectory_Single_Object_Explo.py b/EMT/scripts/Plot_Trajectory_Single_Object_Explo.py similarity index 100% rename from lmt-analysis/LMT/scripts/Plot_Trajectory_Single_Object_Explo.py rename to EMT/scripts/Plot_Trajectory_Single_Object_Explo.py diff --git a/lmt-analysis/LMT/scripts/Rebuild all events.ipynb b/EMT/scripts/Rebuild all events.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild all events.ipynb rename to EMT/scripts/Rebuild all events.ipynb diff --git a/lmt-analysis/LMT/scripts/Rebuild_All_Events.py b/EMT/scripts/Rebuild_All_Events.py similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild_All_Events.py rename to EMT/scripts/Rebuild_All_Events.py diff --git a/lmt-analysis/LMT/scripts/Rebuild_All_Exclusive_Contact_Events.py b/EMT/scripts/Rebuild_All_Exclusive_Contact_Events.py similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild_All_Exclusive_Contact_Events.py rename to EMT/scripts/Rebuild_All_Exclusive_Contact_Events.py diff --git a/lmt-analysis/LMT/scripts/Rebuild_All_Profile_Relative.py b/EMT/scripts/Rebuild_All_Profile_Relative.py similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild_All_Profile_Relative.py rename to EMT/scripts/Rebuild_All_Profile_Relative.py diff --git a/lmt-analysis/LMT/scripts/Rebuild_All_Profile_deprecated.py b/EMT/scripts/Rebuild_All_Profile_deprecated.py similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild_All_Profile_deprecated.py rename to EMT/scripts/Rebuild_All_Profile_deprecated.py diff --git a/lmt-analysis/LMT/scripts/Rebuild_info_mice.py b/EMT/scripts/Rebuild_info_mice.py similarity index 100% rename from lmt-analysis/LMT/scripts/Rebuild_info_mice.py rename to EMT/scripts/Rebuild_info_mice.py diff --git a/lmt-analysis/LMT/scripts/SemiAutomaticNightInput.py b/EMT/scripts/SemiAutomaticNightInput.py similarity index 100% rename from lmt-analysis/LMT/scripts/SemiAutomaticNightInput.py rename to EMT/scripts/SemiAutomaticNightInput.py diff --git a/lmt-analysis/LMT/scripts/SetGenotype.ipynb b/EMT/scripts/SetGenotype.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/SetGenotype.ipynb rename to EMT/scripts/SetGenotype.ipynb diff --git a/lmt-analysis/LMT/scripts/Show Sensor Data.ipynb b/EMT/scripts/Show Sensor Data.ipynb similarity index 100% rename from lmt-analysis/LMT/scripts/Show Sensor Data.ipynb rename to EMT/scripts/Show Sensor Data.ipynb diff --git a/lmt-analysis/LMT/scripts/ShowLog.py b/EMT/scripts/ShowLog.py similarity index 100% rename from lmt-analysis/LMT/scripts/ShowLog.py rename to EMT/scripts/ShowLog.py diff --git a/lmt-analysis/LMT/scripts/__init__.py b/EMT/scripts/__init__.py similarity index 100% rename from lmt-analysis/LMT/scripts/__init__.py rename to EMT/scripts/__init__.py diff --git a/lmt-analysis/LMT/scripts/checkMove.py b/EMT/scripts/checkMove.py similarity index 100% rename from lmt-analysis/LMT/scripts/checkMove.py rename to EMT/scripts/checkMove.py diff --git a/lmt-analysis/LMT/scripts/checkTimeLine.py b/EMT/scripts/checkTimeLine.py similarity index 100% rename from lmt-analysis/LMT/scripts/checkTimeLine.py rename to EMT/scripts/checkTimeLine.py diff --git a/lmt-analysis/LMT/scripts/fix_RFID.py b/EMT/scripts/fix_RFID.py similarity index 100% rename from lmt-analysis/LMT/scripts/fix_RFID.py rename to EMT/scripts/fix_RFID.py diff --git a/lmt-analysis/LMT/scripts/nightInputFromSensor.py b/EMT/scripts/nightInputFromSensor.py similarity index 100% rename from lmt-analysis/LMT/scripts/nightInputFromSensor.py rename to EMT/scripts/nightInputFromSensor.py diff --git a/lmt-analysis/LMT/scripts/sensor/__init__.py b/EMT/scripts/sensor/__init__.py similarity index 100% rename from lmt-analysis/LMT/scripts/sensor/__init__.py rename to EMT/scripts/sensor/__init__.py diff --git a/lmt-analysis/LMT/scripts/sensor/plotSensorData.py b/EMT/scripts/sensor/plotSensorData.py similarity index 100% rename from lmt-analysis/LMT/scripts/sensor/plotSensorData.py rename to EMT/scripts/sensor/plotSensorData.py diff --git a/lmt-analysis/LMT/scripts/tools/RecoverFrame.py b/EMT/scripts/tools/RecoverFrame.py similarity index 100% rename from lmt-analysis/LMT/scripts/tools/RecoverFrame.py rename to EMT/scripts/tools/RecoverFrame.py diff --git a/lmt-analysis/LMT/scripts/tools/__init__.py b/EMT/scripts/tools/__init__.py similarity index 100% rename from lmt-analysis/LMT/scripts/tools/__init__.py rename to EMT/scripts/tools/__init__.py diff --git a/lmt-analysis/LMT/setup.py b/EMT/setup.py similarity index 100% rename from lmt-analysis/LMT/setup.py rename to EMT/setup.py diff --git a/lmt-analysis/LICENSE b/LICENSE similarity index 100% rename from lmt-analysis/LICENSE rename to LICENSE diff --git a/lmt-analysis/README.md b/README.md similarity index 100% rename from lmt-analysis/README.md rename to README.md diff --git a/lmt-analysis/.idea/.gitignore b/lmt-analysis/.idea/.gitignore deleted file mode 100644 index 26d33521af10bcc7fd8cea344038eaaeb78d0ef5..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/.gitignore +++ /dev/null @@ -1,3 +0,0 @@ -# Default ignored files -/shelf/ -/workspace.xml diff --git a/lmt-analysis/.idea/codestream.xml b/lmt-analysis/.idea/codestream.xml deleted file mode 100644 index 4c83dd346335c92a045fd59abf5afcbda116041c..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/codestream.xml +++ /dev/null @@ -1,6 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<project version="4"> - <component name="CodeStream"> - <option name="webViewContext" value="{"chatProviderAccess":"strict","newPostEntryPoint":"JB Commit Detected","currentTeamId":"6391e6a1d578ac141251fbf7","currentStreamId":"","pullRequestCheckoutBranch":false,"isRepositioning":false,"onboardStep":0,"panelStack":["landing-redirect"],"hasFocus":true,"channelFilter":"all","channelsMuteAll":false,"codemarkFileFilter":"all","codemarkTypeFilter":"all","codemarkTagFilter":"all","codemarkBranchFilter":"all","codemarkAuthorFilter":"all","codemarksFileViewStyle":"inline","codemarksShowArchived":false,"codemarksShowResolved":false,"codemarksWrapComments":false,"showFeedbackSmiley":true,"route":{"name":"newUserEntry","params":{}},"spatialViewShowPRComments":false,"currentPullRequestNeedsRefresh":{"needsRefresh":false,"providerId":"","pullRequestId":""},"__teamless__":{"selectedRegion":"us"},"sessionStart":1676036216924,"isFirstPageview":false,"currentReviewOptions":{"includeLatestCommit":true},"currentReviewId":""}" /> - </component> -</project> \ No newline at end of file diff --git a/lmt-analysis/.idea/lmt-analysis.iml b/lmt-analysis/.idea/lmt-analysis.iml deleted file mode 100644 index a71721b3ab138897c345fc214a2497d147e80fef..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/lmt-analysis.iml +++ /dev/null @@ -1,18 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<module type="PYTHON_MODULE" version="4"> - <component name="NewModuleRootManager"> - <content url="file://$MODULE_DIR$"> - <sourceFolder url="file://$MODULE_DIR$" isTestSource="false" /> - <sourceFolder url="file://$MODULE_DIR$/LMT" isTestSource="false" /> - <sourceFolder url="file://$MODULE_DIR$/LMT/experimental" isTestSource="false" /> - <sourceFolder url="file://$MODULE_DIR$/LMT/lmtanalysis" isTestSource="false" /> - <sourceFolder url="file://$MODULE_DIR$/LMT/scripts" isTestSource="false" /> - </content> - <orderEntry type="jdk" jdkName="Python 3.8 (lmt-analysis)" jdkType="Python SDK" /> - <orderEntry type="sourceFolder" forTests="false" /> - </component> - <component name="PyDocumentationSettings"> - <option name="format" value="PLAIN" /> - <option name="myDocStringFormat" value="Plain" /> - </component> -</module> \ No newline at end of file diff --git a/lmt-analysis/.idea/misc.xml b/lmt-analysis/.idea/misc.xml deleted file mode 100644 index 8e9e65eb586fe20d60e36e1e606ca681bd56e9f4..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/misc.xml +++ /dev/null @@ -1,4 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<project version="4"> - <component name="ProjectRootManager" version="2" project-jdk-name="Python 3.8 (lmt-analysis)" project-jdk-type="Python SDK" /> -</project> \ No newline at end of file diff --git a/lmt-analysis/.idea/modules.xml b/lmt-analysis/.idea/modules.xml deleted file mode 100644 index e3f28c08144a6d93e2e63e701fddee6a9fc47ade..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/modules.xml +++ /dev/null @@ -1,8 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<project version="4"> - <component name="ProjectModuleManager"> - <modules> - <module fileurl="file://$PROJECT_DIR$/.idea/lmt-analysis.iml" filepath="$PROJECT_DIR$/.idea/lmt-analysis.iml" /> - </modules> - </component> -</project> \ No newline at end of file diff --git a/lmt-analysis/.idea/vcs.xml b/lmt-analysis/.idea/vcs.xml deleted file mode 100644 index 94a25f7f4cb416c083d265558da75d457237d671..0000000000000000000000000000000000000000 --- a/lmt-analysis/.idea/vcs.xml +++ /dev/null @@ -1,6 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<project version="4"> - <component name="VcsDirectoryMappings"> - <mapping directory="$PROJECT_DIR$" vcs="Git" /> - </component> -</project> \ No newline at end of file diff --git a/lmt-analysis/.project b/lmt-analysis/.project deleted file mode 100644 index b66a0922992c802417802fba556f19d78a14e88d..0000000000000000000000000000000000000000 --- a/lmt-analysis/.project +++ /dev/null @@ -1,18 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<projectDescription> - <name>lmt-analysis</name> - <comment></comment> - <projects> - <project>USV-analysis</project> - </projects> - <buildSpec> - <buildCommand> - <name>org.python.pydev.PyDevBuilder</name> - <arguments> - </arguments> - </buildCommand> - </buildSpec> - <natures> - <nature>org.python.pydev.pythonNature</nature> - </natures> -</projectDescription> diff --git a/lmt-analysis/.pydevproject b/lmt-analysis/.pydevproject deleted file mode 100644 index f1a73a7b236a9e081199dc2ef75bcb64289bcf39..0000000000000000000000000000000000000000 --- a/lmt-analysis/.pydevproject +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8" standalone="no"?> -<?eclipse-pydev version="1.0"?><pydev_project> - - <pydev_property name="org.python.pydev.PYTHON_PROJECT_INTERPRETER">Default</pydev_property> - - <pydev_property name="org.python.pydev.PYTHON_PROJECT_VERSION">python interpreter</pydev_property> - - <pydev_pathproperty name="org.python.pydev.PROJECT_SOURCE_PATH"> - <path>/${PROJECT_DIR_NAME}/LMT</path> - <path>/${PROJECT_DIR_NAME}</path> - </pydev_pathproperty> -</pydev_project> diff --git a/lmt-analysis/.settings/org.eclipse.core.resources.prefs b/lmt-analysis/.settings/org.eclipse.core.resources.prefs deleted file mode 100644 index 4d92ab903753cf7688263cafd234d13012a2094d..0000000000000000000000000000000000000000 --- a/lmt-analysis/.settings/org.eclipse.core.resources.prefs +++ /dev/null @@ -1,5 +0,0 @@ -eclipse.preferences.version=1 -encoding//LMT/lmtanalysis/AnimalType.py=UTF-8 -encoding//LMT/lmtanalysis/Parameters.py=UTF-8 -encoding//LMT/scripts/Novel_Object_Recognition_Test/ComputeActivityHabituationNorTestRedCage.py=UTF-8 -encoding/<project>=UTF-8 diff --git a/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/inspectionProfiles/profiles_settings.xml b/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/inspectionProfiles/profiles_settings.xml deleted file mode 100644 index 105ce2da2d6447d11dfe32bfb846c3d5b199fc99..0000000000000000000000000000000000000000 --- a/lmt-analysis/LMT/scripts/BehaviouralSequences/.idea/inspectionProfiles/profiles_settings.xml +++ /dev/null @@ -1,6 +0,0 @@ -<component name="InspectionProjectProfileManager"> - <settings> - <option name="USE_PROJECT_PROFILE" value="false" /> - <version value="1.0" /> - </settings> -</component> \ No newline at end of file