from bolsonaro.data.dataset_parameters import DatasetParameters from bolsonaro.data.dataset_loader import DatasetLoader from bolsonaro.models.model_factory import ModelFactory from bolsonaro.models.model_parameters import ModelParameters from bolsonaro.trainer import Trainer from bolsonaro.utils import resolve_experiment_id from bolsonaro import LOG_PATH from bolsonaro.error_handling.logger_factory import LoggerFactory from dotenv import find_dotenv, load_dotenv import argparse import pathlib import random import os import errno if __name__ == "__main__": # get environment variables in .env load_dotenv(find_dotenv('.env.example')) default_dataset_name = 'boston' default_normalize = True default_wo_normalization = False default_forest_size = 100 default_extracted_forest_size = 10 # the models will be stored in a directory structure like: models/{experiment_id}/seeds/{seed_nb}/extracted_forest_size/{nb_extracted_trees} default_models_dir = os.environ["project_dir"] + os.sep + 'models' default_dev_size = 0.2 default_test_size = 0.2 default_random_seed_number = 1 begin_random_seed_range = 1 end_random_seed_range = 2000 default_train_on_subset = 'train' parser = argparse.ArgumentParser(formatter_class=argparse.ArgumentDefaultsHelpFormatter) parser.add_argument('--dataset_name', nargs='?', type=str, default=default_dataset_name, help='Specify the dataset. Regression: boston, diabetes, linnerud, california_housing. Classification: iris, digits, wine, breast_cancer, olivetti_faces, 20newsgroups, 20newsgroups_vectorized, lfw_people, lfw_pairs, covtype, rcv1, kddcup99.') parser.add_argument('--wo_normalization', action='store_true', default=default_wo_normalization, help='Withouyt normalize the data by doing the L2 division of the pred vectors.') parser.add_argument('--forest_size', nargs='?', type=int, default=default_forest_size, help='The number of trees of the random forest.') parser.add_argument('--extracted_forest_size', nargs='+', type=int, default=default_extracted_forest_size, help='The number of trees selected by OMP.') parser.add_argument('--models_dir', nargs='?', type=str, default=default_models_dir, help='The output directory of the trained models.') parser.add_argument('--dev_size', nargs='?', type=float, default=default_dev_size, help='Dev subset ratio.') parser.add_argument('--test_size', nargs='?', type=float, default=default_test_size, help='Test subset ratio.') parser.add_argument('--random_seed_number', nargs='?', type=int, default=default_random_seed_number, help='Number of random seeds used.') parser.add_argument('--seeds', nargs='+', type=int, default=None, help='Specific a list of seeds instead of generate them randomly') parser.add_argument('--train_on_subset', nargs='?', type=str, default=default_train_on_subset, help='Specify on witch subset the model will be trained (either train or dev).') args = parser.parse_args() pathlib.Path(args.models_dir).mkdir(parents=True, exist_ok=True) logger = LoggerFactory.create(LOG_PATH, os.path.basename(__file__)) args.extracted_forest_size = args.extracted_forest_size \ if type(args.extracted_forest_size) == list \ else [args.extracted_forest_size] if args.seeds != None and args.random_seed_number > 1: logger.warning('seeds and random_seed_number parameters are both specified. Seeds will be used.') seeds = args.seeds if args.seeds is not None \ else [random.randint(begin_random_seed_range, end_random_seed_range) \ for i in range(args.random_seed_number)] normalize = default_normalize and args.wo_normalization is False logger.debug('normalize={}'.format(normalize)) experiment_id = resolve_experiment_id(args.models_dir) experiment_id_str = str(experiment_id) for seed in seeds: logger.debug('Seed={}'.format(seed)) seed_str = str(seed) models_dir = args.models_dir + os.sep + experiment_id_str + os.sep + 'seeds' + \ os.sep + seed_str try: os.makedirs(models_dir) except OSError as e: if e.errno != errno.EEXIST: raise dataset_parameters = DatasetParameters( name=args.dataset_name, test_size=args.test_size, dev_size=args.dev_size, random_state=seed, normalize=normalize, train_on_subset=args.train_on_subset ) dataset_parameters.save(models_dir, experiment_id_str) dataset = DatasetLoader.load(dataset_parameters) trainer = Trainer(dataset) for extracted_forest_size in args.extracted_forest_size: logger.debug('extracted_forest_size={}'.format(extracted_forest_size)) sub_models_dir = models_dir + os.sep + 'extracted_forest_size' + os.sep + str(extracted_forest_size) try: os.makedirs(sub_models_dir) except OSError as e: if e.errno != errno.EEXIST: raise model_parameters = ModelParameters( forest_size=args.forest_size, extracted_forest_size=extracted_forest_size, seed=seed, normalize=normalize ) model_parameters.save(sub_models_dir, experiment_id) model = ModelFactory.build(dataset.task, model_parameters) trainer.train(model, sub_models_dir) logger.info('Error on test set: {}'.format(model.score(dataset.X_test, dataset.y_test))) logger.info('Accuracy on test set: {}'.format(model.score_regressor(dataset.X_test, dataset.y_test)))