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Commit 9d300058 authored by Loic-Lenof's avatar Loic-Lenof
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Small changes 

- removed results and variable used during test sessions
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with 525 additions and 549 deletions
BBPs/3-count_stats.py
+ 2
− 2
View file @ 9d300058
...@@ -25,7 +25,7 @@ print("Parameters ready to use!") ...@@ -25,7 +25,7 @@ print("Parameters ready to use!")
#%% Importation of ata and function #%% Importation of ata and function
print("\rImportation of csv data", end="\r") print("\rImportation of csv data", end="\r")
from FuncUtils import get_csv, get_category from BBPUtils import get_csv, get_category
data_20_21, audio_paths = get_csv(csv_f, slash="/") data_20_21, audio_paths = get_csv(csv_f, slash="/")
print("Importation of csv data complete!") print("Importation of csv data complete!")
...@@ -92,7 +92,7 @@ if input('\nSave table with categories [Y/n] ? ') == 'Y': ...@@ -92,7 +92,7 @@ if input('\nSave table with categories [Y/n] ? ') == 'Y':
for cat in ['acoustic', 'fishing_net', 'behavior', 'beacon', 'date', 'number', 'net']: for cat in ['acoustic', 'fishing_net', 'behavior', 'beacon', 'date', 'number', 'net']:
data_to_save[cat] = get_category(files_in_folder, audio_paths, data_20_21, cat) data_to_save[cat] = get_category(files_in_folder, audio_paths, data_20_21, cat)
data_to_save['audio_names'] = [file[:-10] for file in files_in_folder] data_to_save['audio_names'] = files_in_folder
data_to_save['Buzz'] = Buzz_per_file.astype(int) data_to_save['Buzz'] = Buzz_per_file.astype(int)
data_to_save['Burst-pulse'] = Burst_per_file.astype(int) data_to_save['Burst-pulse'] = Burst_per_file.astype(int)
data_to_save.to_csv(os.path.join(save_f, datetime.now().strftime("%d-%m-%y_%Hh%M")+"_number_of_BBP.csv"), data_to_save.to_csv(os.path.join(save_f, datetime.now().strftime("%d-%m-%y_%Hh%M")+"_number_of_BBP.csv"),
......
BBPs/BBPUtils.py
+ 2
− 2
View file @ 9d300058
...@@ -78,9 +78,9 @@ def get_csv(csv_folder, slash="\\"): ...@@ -78,9 +78,9 @@ def get_csv(csv_folder, slash="\\"):
csv_names = [a for a in os.listdir(csv_folder) if a.endswith('.csv')] csv_names = [a for a in os.listdir(csv_folder) if a.endswith('.csv')]
# import data # import data
data = import_csv(csv_names[0], csv_folder, separator=slash) data = import_csv(csv_names[0], csv_folder, slash=slash)
for i in range(1,len(csv_names)): for i in range(1,len(csv_names)):
data = data + import_csv(csv_names[i], csv_folder, separator=slash)[1:] data = data + import_csv(csv_names[i], csv_folder, slash=slash)[1:]
data_frame = pd.DataFrame(data=data[:][1:], columns=data[:][0]) data_frame = pd.DataFrame(data=data[:][1:], columns=data[:][0])
# change dtype for selected columns # change dtype for selected columns
......
BBPs/Results/16-06-22_14h00_number_of_BBP.csv
+ 490
− 490
View file @ 9d300058
number_of_BBP,acoustic,fishing_net,behavior,beacon,date,number,net,audio_names,Buzz,Burst-pulse number_of_BBP,acoustic,fishing_net,behavior,beacon,date,number,net,audio_names,Buzz,Burst-pulse
0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210709_070500,0,0
0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_070600,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_070700,0,0
1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,1,0 1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_070800,1,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_070900,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071000,0,0
0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071100,0,0
0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071200,0,0
0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071300,0,0
0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071400,0,0
0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_071500,0,0
0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210709_073400,0,0
2,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,1,1 2,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_073500,1,1
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_073600,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_073700,0,0
1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,1 1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_073800,0,1
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_073900,0,0
1,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,1 1,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_074000,0,1
0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_074700,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_074800,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_074900,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_075000,0,0
0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_075100,0,0
0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_075200,0,0
0,AV,SSF,DEPL,NC,09/07/2021,14,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,09/07/2021,14,SSF,SCW6070_20210709_085500,0,0
2,AV+D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,0,2 2,AV+D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_085600,0,2
14,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,5,9 14,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_085700,5,9
0,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_085800,0,0
0,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_085900,0,0
1,D+AP,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,0,1 1,D+AP,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_090000,0,1
0,AP,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC,09/07/2021,14,SSF,SCW6070_20210709_090100,0,0
0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_094400,0,0
0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_094500,0,0
0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,09/07/2021,6,SSF,SCW6070_20210709_095300,0,0
1,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,1,0 1,AV+D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095400,1,0
1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,1 1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095500,0,1
1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,1,0 1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095600,1,0
1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,1,0 1,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095700,1,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095800,0,0
0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC,09/07/2021,6,SSF,SCW6070_20210709_095900,0,0
0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100000,0,0
0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100100,0,0
0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100200,0,0
2,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,2 2,D,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100300,0,2
0,D+AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,D+AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100400,0,0
0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100500,0,0
0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100600,0,0
0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210,0,0 0,AP,F,DEPL,DC,09/07/2021,6,grand_filet,SCW6070_20210709_100700,0,0
0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210,0,0 0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210709_102700,0,0
0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210,0,0 0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210709_102800,0,0
0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210,0,0 0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210709_102900,0,0
0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210,0,0 0,T,F,DEPL,DC,09/07/2021,14,grand_filet,SCW6070_20210709_103000,0,0
2,T,SSF,CHAS,DC,09/07/2021,15,SSF,SCW6070_20210,1,1 2,T,SSF,CHAS,DC,09/07/2021,15,SSF,SCW6070_20210709_104100,1,1
5,T,SSF,CHAS,DC,09/07/2021,15,SSF,SCW6070_20210,4,1 5,T,SSF,CHAS,DC,09/07/2021,15,SSF,SCW6070_20210709_104200,4,1
0,T,SSF,CHAS,DC,09/07/2021,20,SSF,SCW6070_20210,0,0 0,T,SSF,CHAS,DC,09/07/2021,20,SSF,SCW6070_20210709_104300,0,0
5,AV,SSF,DEPL,NC,09/07/2021,12,SSF,SCW6070_20210,4,1 5,AV,SSF,DEPL,NC,09/07/2021,12,SSF,SCW6070_20210709_120800,4,1
3,AV+D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,2,1 3,AV+D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_120900,2,1
1,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,1,0 1,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_121000,1,0
0,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,0,0 0,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_121100,0,0
0,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,0,0 0,D,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_121200,0,0
0,D+AP,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,0,0 0,D+AP,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_121300,0,0
0,AP,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210,0,0 0,AP,SSF,CHAS,DC,09/07/2021,12,SSF,SCW6070_20210709_121400,0,0
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3,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210,3,0 3,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210711_055700,3,0
0,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210,0,0 0,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210711_055800,0,0
1,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210,0,1 1,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210711_055900,0,1
0,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210,0,0 0,T,SSF,DEPL,DC70,11/07/2021,10,SSF,SCW6070_20210711_060000,0,0
0,AV,SSF,CHAS,NC,11/07/2021,5,SSF,SCW6070_20210,0,0 0,AV,SSF,CHAS,NC,11/07/2021,5,SSF,SCW6070_20210711_073300,0,0
0,AV+D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_073400,0,0
0,D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_073500,0,0
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0,D+AP,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_073700,0,0
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0,AP,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,AP+AV,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_073900,0,0
0,AV+D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_074000,0,0
0,D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_074100,0,0
0,D+AP,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,11/07/2021,5,SSF,SCW6070_20210711_074200,0,0
0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210718_085800,0,0
0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_085900,0,0
0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090000,0,0
0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090100,0,0
0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090200,0,0
2,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210,1,1 2,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210718_090500,1,1
0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090600,0,0
0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090700,0,0
0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_090800,0,0
1,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210,1,0 1,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210718_091100,1,0
0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_091200,0,0
0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_091300,0,0
0,AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_091400,0,0
0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210718_091600,0,0
0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_091700,0,0
0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV,SSF,DEPL,NC,18/07/2021,12,SSF,SCW6070_20210718_100500,0,0
0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,AV+D,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_100600,0,0
0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210,0,0 0,D+AP,SSF,DEPL,DC70,18/07/2021,12,SSF,SCW6070_20210718_100700,0,0
1,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200,1,0 1,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200711_082400,1,0
12,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200,10,2 12,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200711_082500,10,2
0,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200,0,0 0,AV,SSF,DEPL,NC,11/07/2020,12,SSF,SCW1807_20200711_082600,0,0
1,AV,SSF,CHAS,NC,11/07/2020,15,SSF,SCW1807_20200,1,0 1,AV,SSF,CHAS,NC,11/07/2020,15,SSF,SCW1807_20200711_082700,1,0
1,AV,SSF,DEPL,NC,11/07/2020,4,SSF,SCW1807_20200,1,0 1,AV,SSF,DEPL,NC,11/07/2020,4,SSF,SCW1807_20200711_083600,1,0
5,AV+D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200,2,3 5,AV+D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200711_083700,2,3
3,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200,1,2 3,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200711_083800,1,2
3,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200,2,1 3,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200711_083900,2,1
0,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200,0,0 0,D,SSF,DEPL,DOL4,11/07/2020,4,SSF,SCW1807_20200711_084000,0,0
4,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,3,1 4,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084100,3,1
5,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,4,1 5,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084200,4,1
0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,0,0 0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084300,0,0
0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,0,0 0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084400,0,0
0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,0,0 0,D,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084500,0,0
0,D+AP,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200,0,0 0,D+AP,SSF,DEPL,DOL4,11/07/2020,7,SSF,SCW1807_20200711_084600,0,0
0,AV+D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,0 0,AV+D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085300,0,0
3,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,2,1 3,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085400,2,1
6,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,6,0 6,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085500,6,0
4,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,4 4,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085600,0,4
5,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,5 5,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085700,0,5
2,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,1,1 2,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_085800,1,1
3,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,3 3,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090100,0,3
9,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,4,5 9,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090200,4,5
15,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,4,11 15,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090300,4,11
11,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,1,10 11,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090400,1,10
1,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,1 1,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090500,0,1
0,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,0 0,D,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090600,0,0
0,D+AP,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200,0,0 0,D+AP,SSF,SOCI,DOL4,11/07/2020,8,SSF,SCW1807_20200711_090700,0,0
0,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200711_093300,0,0
0,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200711_093400,0,0
10,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200,8,2 10,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200711_093500,8,2
9,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200,6,3 9,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200711_093600,6,3
5,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200,2,3 5,D,F,DEPL,DOL4,11/07/2020,8,chalut_blanc,SCW1807_20200711_093700,2,3
1,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200,1,0 1,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200711_093800,1,0
2,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200,2,0 2,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200711_093900,2,0
0,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200711_094000,0,0
0,D+AP,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200711_094100,0,0
0,AP,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200,0,0 0,AP,F,DEPL,DOL4,11/07/2020,5,chalut_blanc,SCW1807_20200711_094200,0,0
0,AV+D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200,0,0 0,AV+D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200711_101700,0,0
0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200,0,0 0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200711_101800,0,0
0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200,0,0 0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200711_101900,0,0
0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200,0,0 0,D,F,DEPL,DOL7,11/07/2020,5,chalut_vert,SCW1807_20200711_102000,0,0
3,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200,2,1 3,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200711_114000,2,1
1,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200,0,1 1,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200711_114100,0,1
4,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200,4,0 4,D,F,CHAS,DOL7,11/07/2020,12,chalut_vert,SCW1807_20200711_114200,4,0
6,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200,0,6 6,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200711_114300,0,6
3,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200,1,2 3,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200711_114400,1,2
1,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200,1,0 1,D,F,DEPL,DOL7,11/07/2020,35,chalut_vert,SCW1807_20200711_114500,1,0
3,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200,3,0 3,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200711_114900,3,0
19,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200,16,3 19,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200711_115000,16,3
27,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200,23,4 27,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200711_115100,23,4
17,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200,16,1 17,D,F,CHAS,DOL7,11/07/2020,8,chalut_vert,SCW1807_20200711_115200,16,1
5,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200,4,1 5,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200711_115600,4,1
3,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200,1,2 3,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200711_115700,1,2
2,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200,2,0 2,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200711_115800,2,0
1,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200,1,0 1,D,F,DEPL,DOL7,11/07/2020,6,chalut_vert,SCW1807_20200711_115900,1,0
0,AV,F,DEPL,NC,11/07/2020,4,chalut_blanc,SCW1807_20200,0,0 0,AV,F,DEPL,NC,11/07/2020,4,chalut_blanc,SCW1807_20200711_123400,0,0
4,D,F,DEPL,DOL4,11/07/2020,4,chalut_blanc,SCW1807_20200,4,0 4,D,F,DEPL,DOL4,11/07/2020,4,chalut_blanc,SCW1807_20200711_123500,4,0
0,D+AP,F,DEPL,DOL4,11/07/2020,4,chalut_blanc,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL4,11/07/2020,4,chalut_blanc,SCW1807_20200711_123600,0,0
0,AV,F,DEPL,NC,11/07/2020,3,chalut_blanc,SCW1807_20200,0,0 0,AV,F,DEPL,NC,11/07/2020,3,chalut_blanc,SCW1807_20200711_131500,0,0
0,AV+D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200,0,0 0,AV+D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200711_131600,0,0
1,D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200,0,1 1,D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200711_131700,0,1
0,D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL3,11/07/2020,3,chalut_blanc,SCW1807_20200711_131800,0,0
0,D+AP,F,DEPL,DOL3,11/07/2020,4,chalut_blanc,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL3,11/07/2020,4,chalut_blanc,SCW1807_20200711_131900,0,0
0,AV+D,F,DEPL,DOL3,11/07/2020,4,chalut_blanc,SCW1807_20200,0,0 0,AV+D,F,DEPL,DOL3,11/07/2020,4,chalut_blanc,SCW1807_20200711_132000,0,0
0,D+AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200711_132100,0,0
0,AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200,0,0 0,AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200711_132200,0,0
0,AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200,0,0 0,AP,F,DEPL,DOL3,11/07/2020,11,chalut_blanc,SCW1807_20200711_132300,0,0
2,AV,SSF,DEPL,NC,12/07/2020,12,SSF,SCW1807_20200,0,2 2,AV,SSF,DEPL,NC,12/07/2020,12,SSF,SCW1807_20200712_090300,0,2
2,AV,SSF,DEPL,NC,12/07/2020,12,SSF,SCW1807_20200,2,0 2,AV,SSF,DEPL,NC,12/07/2020,12,SSF,SCW1807_20200712_090400,2,0
3,AV+D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,3,0 3,AV+D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_090500,3,0
0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_090600,0,0
1,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,1,0 1,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_090700,1,0
0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_090800,0,0
0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,0,0 0,D,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_090900,0,0
0,D+AP,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL4,12/07/2020,12,chalut_blanc,SCW1807_20200712_091000,0,0
1,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,0,1 1,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_093900,0,1
2,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,0,2 2,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_094000,0,2
2,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,2,0 2,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_094100,2,0
1,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,1,0 1,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_094200,1,0
3,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,3,0 3,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_094300,3,0
0,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200,0,0 0,T,F,DEPL,DOL3,12/07/2020,15,chalut_blanc,SCW1807_20200712_094400,0,0
2,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200,2,0 2,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200712_100900,2,0
1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200,1,0 1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200712_101000,1,0
1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200,1,0 1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200712_101100,1,0
1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200,1,0 1,T,F,DEPL,DOL3,12/07/2020,5,chalut_blanc,SCW1807_20200712_101200,1,0
4,AV+D,SSF,SOCI,DOL1,12/07/2020,6,SSF,SCW1807_20200,2,2 4,AV+D,SSF,SOCI,DOL1,12/07/2020,6,SSF,SCW1807_20200712_114800,2,2
0,D,SSF,DEPL,DOL1,12/07/2020,3,SSF,SCW1807_20200,0,0 0,D,SSF,DEPL,DOL1,12/07/2020,3,SSF,SCW1807_20200712_114900,0,0
10,D,SSF,DEPL,DOL1,12/07/2020,3,SSF,SCW1807_20200,9,1 10,D,SSF,DEPL,DOL1,12/07/2020,3,SSF,SCW1807_20200712_115000,9,1
9,D,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200,6,3 9,D,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200712_115100,6,3
0,D,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200,0,0 0,D,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200712_115200,0,0
2,D+AP,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200,1,1 2,D+AP,F,DEPL,DOL1,12/07/2020,3,tremail,SCW1807_20200712_115300,1,1
0,T,F,DEPL,DOL1,12/07/2020,6,tremail,SCW1807_20200,0,0 0,T,F,DEPL,DOL1,12/07/2020,6,tremail,SCW1807_20200712_130900,0,0
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1,AP,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200,1,0 1,AP,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200712_134900,1,0
0,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200712_135500,0,0
6,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200,5,1 6,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200712_135600,5,1
4,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200,2,2 4,T,F,DEPL,DOL5,12/07/2020,3,chalut_vert,SCW1807_20200712_135700,2,2
1,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200,1,0 1,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200712_135800,1,0
0,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200712_135900,0,0
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2,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200,0,2 2,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200712_140300,0,2
0,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,12/07/2020,2,chalut_vert,SCW1807_20200712_140400,0,0
4,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200,4,0 4,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200712_140500,4,0
1,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200,1,0 1,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200712_140600,1,0
1,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200,0,1 1,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200712_140700,0,1
0,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,12/07/2020,6,chalut_vert,SCW1807_20200712_140800,0,0
2,T,F,DEPL,DOL5,12/07/2020,5,chalut_vert,SCW1807_20200,1,1 2,T,F,DEPL,DOL5,12/07/2020,5,chalut_vert,SCW1807_20200712_142600,1,1
1,T,F,DEPL,DOL5,12/07/2020,5,chalut_vert,SCW1807_20200,1,0 1,T,F,DEPL,DOL5,12/07/2020,5,chalut_vert,SCW1807_20200712_142700,1,0
3,AV,SSF,DEPL,NC,13/07/2020,30,SSF,SCW1807_20200,2,1 3,AV,SSF,DEPL,NC,13/07/2020,30,SSF,SCW1807_20200713_063700,2,1
5,AV+D,SSF,DEPL,DOL5,13/07/2020,10,SSF,SCW1807_20200,2,3 5,AV+D,SSF,DEPL,DOL5,13/07/2020,10,SSF,SCW1807_20200713_063800,2,3
5,D,SSF,DEPL,DOL5,13/07/2020,10,SSF,SCW1807_20200,3,2 5,D,SSF,DEPL,DOL5,13/07/2020,10,SSF,SCW1807_20200713_063900,3,2
3,D+AP,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,3,0 3,D+AP,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064000,3,0
8,AV,F,DEPL,NC,13/07/2020,10,chalut_vert,SCW1807_20200,5,3 8,AV,F,DEPL,NC,13/07/2020,10,chalut_vert,SCW1807_20200713_064100,5,3
4,AV+D,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,2,2 4,AV+D,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064200,2,2
9,D+AP,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,1,8 9,D+AP,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064300,1,8
10,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,4,6 10,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064400,4,6
8,T,F,DEPL,DOL5,13/07/2020,12,chalut_vert,SCW1807_20200,4,4 8,T,F,DEPL,DOL5,13/07/2020,12,chalut_vert,SCW1807_20200713_064500,4,4
10,T,F,DEPL,DOL5,13/07/2020,12,chalut_vert,SCW1807_20200,9,1 10,T,F,DEPL,DOL5,13/07/2020,12,chalut_vert,SCW1807_20200713_064600,9,1
0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064800,0,0
1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,1,0 1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_064900,1,0
1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,1,0 1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_065000,1,0
11,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,8,3 11,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_071900,8,3
10,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,3,7 10,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_072000,3,7
1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,0,1 1,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_072100,0,1
0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_072200,0,0
0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200,0,0 0,T,F,DEPL,DOL5,13/07/2020,10,chalut_vert,SCW1807_20200713_072300,0,0
2,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,2,0 2,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073200,2,0
13,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,6,7 13,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073300,6,7
4,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,2,2 4,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073400,2,2
5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,4,1 5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073500,4,1
12,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,5,7 12,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073600,5,7
10,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,9,1 10,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073700,9,1
5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,4,1 5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073800,4,1
5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200,3,2 5,T,F,DEPL,DOL5,13/07/2020,8,chalut_vert,SCW1807_20200713_073900,3,2
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9,D,SSF,SOCI,DOL6,13/07/2020,6,SSF,SCW1807_20200,2,7 9,D,SSF,SOCI,DOL6,13/07/2020,6,SSF,SCW1807_20200713_075800,2,7
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1,AP,F,DEPL,DOL3_N36,17/07/2020,12,chalut_vert,SCW1807_20200,1,0 1,AP,F,DEPL,DOL3_N36,17/07/2020,12,chalut_blanc,SCW1807_20200717_071600,1,0
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1,AV+D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200,1,0 1,AV+D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200717_080800,1,0
2,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200,1,1 2,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200717_080900,1,1
2,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200,1,1 2,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200717_081000,1,1
1,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200,1,0 1,D,F,DEPL,DOL1_N26,17/07/2020,12,tremail,SCW1807_20200717_081100,1,0
10,D,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200,7,3 10,D,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200717_081200,7,3
4,D+AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200,1,3 4,D+AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200717_081300,1,3
5,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200,5,0 5,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200717_081400,5,0
0,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200717_081500,0,0
1,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200,1,0 1,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200717_081600,1,0
0,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200717_081700,0,0
0,AP,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200,0,0 0,AP+AV,F,DEPL,DOL1_N26,17/07/2020,7,tremail,SCW1807_20200717_081800,0,0
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2,AV+D,F,DEPL,DOL1_N26,17/07/2020,25,tremail,SCW1807_20200,2,0 2,AV+D,F,DEPL,DOL1_N26,17/07/2020,25,tremail,SCW1807_20200717_083800,2,0
0,D+AP,F,DEPL,DOL1_N26,17/07/2020,25,tremail,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL1_N26,17/07/2020,25,tremail,SCW1807_20200717_083900,0,0
1,AV+D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,1,0 1,AV+D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_084200,1,0
2,D,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200,2,0 2,D,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200717_084300,2,0
0,D+AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200,0,0 0,D+AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200717_084400,0,0
0,AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,20,tremail,SCW1807_20200717_084500,0,0
0,AV+D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,0,0 0,AV+D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_085700,0,0
6,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,3,3 6,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_085800,3,3
3,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,2,1 3,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_085900,2,1
3,D,F,DEPL,DOL1_N26,17/07/2020,5,tremail,SCW1807_20200,3,0 3,D,F,DEPL,DOL1_N26,17/07/2020,5,tremail,SCW1807_20200717_090000,3,0
9,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,8,1 9,D,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090100,8,1
6,D+AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,4,2 6,D+AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090200,4,2
5,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,5,0 5,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090300,5,0
1,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,1,0 1,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090400,1,0
1,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,1,0 1,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090500,1,0
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3,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,2,1 3,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090700,2,1
0,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,4,tremail,SCW1807_20200717_090800,0,0
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7,AV+D,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200,4,3 7,AV+D,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200717_091800,4,3
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0,AP,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200717_092200,0,0
0,AP,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200,0,0 0,AP,F,DEPL,DOL1_N26,17/07/2020,10,tremail,SCW1807_20200717_092300,0,0
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4,AV+D,SSF,DEPL,DOL1_N26,17/07/2020,5,SSF,SCW1807_20200,4,0 4,AV+D,SSF,DEPL,DOL1_N26,17/07/2020,5,SSF,SCW1807_20200717_111700,4,0
9,D,SSF,DEPL,DOL1_N26,17/07/2020,3,SSF,SCW1807_20200,8,1 9,D,SSF,DEPL,DOL1_N26,17/07/2020,3,SSF,SCW1807_20200717_111800,8,1
2,D+AP,SSF,DEPL,DOL1_N26,17/07/2020,3,SSF,SCW1807_20200,2,0 2,D+AP,SSF,DEPL,DOL1_N26,17/07/2020,3,SSF,SCW1807_20200717_111900,2,0
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0,AP,F,DEPL,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,0,0 0,AP,F,DEPL,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_082500,0,0
5,AV+D,F,CHAS,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,5,0 5,AV+D,F,CHAS,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_084500,5,0
9,D+AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,8,1 9,D+AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_084600,8,1
13,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,13,0 13,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_084700,13,0
18,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,17,1 18,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_084800,17,1
16,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,15,1 16,AP,F,CHAS,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_084900,15,1
4,AP,F,DEPL,DOL3_N36,18/07/2020,10,chalut_vert,SCW1807_20200,4,0 4,AP,F,DEPL,DOL3_N36,18/07/2020,10,chalut_blanc,SCW1807_20200718_085000,4,0
2,AV,F,DEPL,NC,18/07/2020,20,chalut_vert,SCW1807_20200,2,0 2,AV,F,DEPL,NC,18/07/2020,20,chalut_blanc,SCW1807_20200718_085700,2,0
19,AV+D,F,DEPL,DOL3_N36,18/07/2020,20,chalut_vert,SCW1807_20200,14,5 19,AV+D,F,DEPL,DOL3_N36,18/07/2020,20,chalut_blanc,SCW1807_20200718_085800,14,5
7,D,F,DEPL,DOL3_N36,18/07/2020,20,chalut_vert,SCW1807_20200,7,0 7,D,F,DEPL,DOL3_N36,18/07/2020,20,chalut_blanc,SCW1807_20200718_085900,7,0
BBPs/__pycache__/BBPUtils.cpython-39.pyc 0 → 100644
+ 0
− 0
View file @ 9d300058
File added
Clicks/1-detection_of_clicks.py
+ 1
− 1
View file @ 9d300058
...@@ -84,7 +84,7 @@ for file in range(len(audio_paths)): ...@@ -84,7 +84,7 @@ for file in range(len(audio_paths)):
map_clean=np.copy(map_peaks) map_clean=np.copy(map_peaks)
# save detections # save detections
# np.save(os.path.join(save_f, audio_paths[file][-27:-4], "_peaks"), # np.save(os.path.join(save_f, audio_paths[file][-27:-4] + "_peaks"),
# np.nonzero(map_clean)[0]) # np.nonzero(map_clean)[0])
print(f"\r\t1- {file+1} on {len(audio_paths)}: Found {len(np.nonzero(map_clean)[0])} \ print(f"\r\t1- {file+1} on {len(audio_paths)}: Found {len(np.nonzero(map_clean)[0])} \
......
Stats/.Rhistory
+ 20
− 20
View file @ 9d300058
numb_stats_c[is.na(numb_stats_c)] <- 0
numb_stats_c$number <- as.factor(numb_stats_c$number)
numb_stats_c %>%
ggplot(aes(x=number, y=mean, group=1)) +
geom_errorbar(aes(x=number, ymin=mean-ic, ymax=mean+ic),
color="red", width=.1)+
geom_point() + geom_line() +
theme_classic() + theme(text=element_text(size=12)) +
ylab("Mean number of clicks per min")+
xlab("Number of echolocation clicks in group")
########################################################################
# STATISTICS
# Author : Loic LEHNHOFF
# Adapted from Yannick OUTREMAN
# Agrocampus Ouest - 2020
#######################################################################
library(pscl)
library(MASS) library(MASS)
library(lmtest) library(lmtest)
library(multcomp) library(multcomp)
...@@ -46,7 +29,22 @@ acoustic.dta <- clicks.dta ...@@ -46,7 +29,22 @@ acoustic.dta <- clicks.dta
acoustic.dta$number_of_bbp <- bbp.dta$number_of_BBP acoustic.dta$number_of_bbp <- bbp.dta$number_of_BBP
acoustic.dta$total_whistles_duration <- whistles.dta$total_whistles_duration acoustic.dta$total_whistles_duration <- whistles.dta$total_whistles_duration
rm(whistles.dta, bbp.dta, clicks.dta) rm(whistles.dta, bbp.dta, clicks.dta)
# suppress "T" acoustic data (data not related to this analysis) # add group IDs
id2020 <- read.table(file=paste0(folder, 'CSV_data/Audio_Data_2020.csv'),
sep = ',', header=TRUE)[1:396,]
id2021 <- read.table(file=paste0(folder, 'CSV_data/Audio_Data_2021.csv'),
sep = ',', header=TRUE)[1:96,]
id2021$ID <- id2021$ID+max(id2020$ID)
id2021$Seq <- id2021$Seq+max(id2020$Seq)
id.dta <- rbind(id2020, id2021)
id.dta$Fichier.Audio <-str_sub(id.dta$Fichier.Audio, -27, -5)
acoustic.dta$ID <- rep(-1, 490)
for (name in acoustic.dta$audio_names){
acoustic.dta$ID[match(name, acoustic.dta$audio_names)] <- id.dta$ID[match(name, id.dta$Fichier.Audio)]
}
acoustic.dta$ID <- as.factor(acoustic.dta$ID)
rm(id2020, id2021, id.dta)
# suppress "T" acoustic data (other groups not tested on our variables)
acoustic.dta <- acoustic.dta[acoustic.dta$acoustic!="T",] acoustic.dta <- acoustic.dta[acoustic.dta$acoustic!="T",]
# shuffle dataframe # shuffle dataframe
acoustic.dta <- acoustic.dta[sample(1:nrow(acoustic.dta)), ] acoustic.dta <- acoustic.dta[sample(1:nrow(acoustic.dta)), ]
...@@ -430,7 +428,7 @@ ytitle="Mean number of clicks per dolphin per min")+ ...@@ -430,7 +428,7 @@ ytitle="Mean number of clicks per dolphin per min")+
theme(axis.text.x=element_text(size=8))+ theme(axis.text.x=element_text(size=8))+
scale_x_discrete(guide=guide_axis(n.dodge = 2)) scale_x_discrete(guide=guide_axis(n.dodge = 2))
# NC stands for "Unknown". Corresponding to categories where the beacon was not turned on yet ('BEF') # NC stands for "Unknown". Corresponding to categories where the beacon was not turned on yet ('BEF')
#### Plots by group ID #### #### Plots by number of dolphins ####
# Whistles # Whistles
numb_stats_w <- computeStats(acoustic.dta, number, total_whistles_duration/375) numb_stats_w <- computeStats(acoustic.dta, number, total_whistles_duration/375)
numb_stats_w[is.na(numb_stats_w)] <- 0 numb_stats_w[is.na(numb_stats_w)] <- 0
...@@ -467,7 +465,7 @@ geom_point() + geom_line() + ...@@ -467,7 +465,7 @@ geom_point() + geom_line() +
theme_classic() + theme(text=element_text(size=12)) + theme_classic() + theme(text=element_text(size=12)) +
ylab("Mean number of clicks per min")+ ylab("Mean number of clicks per min")+
xlab("Number of echolocation clicks in group") xlab("Number of echolocation clicks in group")
#### Plots by Number of dolphins in group #### #### Plots by Group ID ####
# Whistles # Whistles
numb_stats_w <- computeStats(acoustic.dta, ID, whistling_time_per_dolphin/375) numb_stats_w <- computeStats(acoustic.dta, ID, whistling_time_per_dolphin/375)
numb_stats_w[is.na(numb_stats_w)] <- 0 numb_stats_w[is.na(numb_stats_w)] <- 0
...@@ -510,3 +508,5 @@ data_test <- acoustic.dta[acoustic.dta$ID!="2",] ...@@ -510,3 +508,5 @@ data_test <- acoustic.dta[acoustic.dta$ID!="2",]
print( posthocKW(data_test$whistling_time_per_dolphin, data_test$ID)) print( posthocKW(data_test$whistling_time_per_dolphin, data_test$ID))
print( posthocKW(data_test$BBPs_per_dolphin, data_test$ID)) print( posthocKW(data_test$BBPs_per_dolphin, data_test$ID))
print( posthocKW(data_test$clicks_per_dolphin, data_test$ID)) print( posthocKW(data_test$clicks_per_dolphin, data_test$ID))
hist(acoustic.dta$ID)
hist(acoustic.dta$number)
Whistles/1-Identification_of_whistles.py
+ 6
− 29
View file @ 9d300058
...@@ -24,7 +24,7 @@ print("Importation of packages complete!") ...@@ -24,7 +24,7 @@ print("Importation of packages complete!")
print("\rSetting up parameters...", end="\r") print("\rSetting up parameters...", end="\r")
audio_f = "./../Audio_data" # Path to recordings audio_f = "./../Audio_data" # Path to recordings
csv_f = "./../CSV_data" # Path to data in csv csv_f = "./../CSV_data" # Path to data in csv
save_f = "./Trajectories" # Path were save_f = "./Trajectories" # Path were results are stored
# Audio parameters # Audio parameters
start = 0 # start time for signal (in sec) start = 0 # start time for signal (in sec)
...@@ -63,21 +63,19 @@ print("Importation of csv data complete!\n") ...@@ -63,21 +63,19 @@ print("Importation of csv data complete!\n")
#%% Main execution #%% Main execution
print("Spectral detector of whistles") print("Spectral detector of whistles")
for file in np.array([418]):#range(len(audio_paths)): for file in range(len(audio_paths)):
# import audio recording # import audio recording
signal, fe = load(os.path.join(audio_f, audio_paths[file][4:8], audio_paths[file]), signal, fe = load(os.path.join(audio_f, audio_paths[file][4:8], audio_paths[file]),
sr=None) sr=None)
signal = signal[int(start*fe):int(stop*fe)] signal = signal[int(start*fe):int(stop*fe)]
# resample # resample
signal_dec = resample(signal, int(((stop-start)*new_sr))) signal_dec = resample(signal, int(((stop-start)*new_sr)))
print("1")
# extract spectral informations # extract spectral informations
Magnitude_audio = stft(signal_dec, n_fft=nfft, hop_length=hop_length) Magnitude_audio = stft(signal_dec, n_fft=nfft, hop_length=hop_length)
spectre = np.copy(np.abs(Magnitude_audio[f_min:,:])) spectre = np.copy(np.abs(Magnitude_audio[f_min:,:]))
# PCEN could replace spectrogram in very noisy recordings # PCEN could replace spectrogram in very noisy recordings
#spectre_pcen = pcen(np.abs(Magnitude_audio) * (2**31), bias=10)[f_min:,:] #spectre_pcen = pcen(np.abs(Magnitude_audio) * (2**31), bias=10)[f_min:,:]
print("2")
# Selection algorithm # Selection algorithm
max_loc_per_bin_check1 = get_local_maxima(spectre, spectre, nrg_rap)[1] max_loc_per_bin_check1 = get_local_maxima(spectre, spectre, nrg_rap)[1]
...@@ -86,7 +84,6 @@ for file in np.array([418]):#range(len(audio_paths)): ...@@ -86,7 +84,6 @@ for file in np.array([418]):#range(len(audio_paths)):
corrected_traj = sparsity_ridoff(final_traj, error_thresh=sparsity) corrected_traj = sparsity_ridoff(final_traj, error_thresh=sparsity)
harmonized_traj = harmonize_trajectories(corrected_traj, min_r=min_r_coef, harmonized_traj = harmonize_trajectories(corrected_traj, min_r=min_r_coef,
min_common=taille_traj_min*2, delete=True) min_common=taille_traj_min*2, delete=True)
print("3")
# Saving results # Saving results
values = np.unique(harmonized_traj)[1:] values = np.unique(harmonized_traj)[1:]
...@@ -96,30 +93,10 @@ for file in np.array([418]):#range(len(audio_paths)): ...@@ -96,30 +93,10 @@ for file in np.array([418]):#range(len(audio_paths)):
dict_traj[key+1] = [np.where(harmonized_traj == value)[0].tolist(), dict_traj[key+1] = [np.where(harmonized_traj == value)[0].tolist(),
np.where(harmonized_traj == value)[1].tolist()] np.where(harmonized_traj == value)[1].tolist()]
startstop[key] = np.array([min(dict_traj[key+1][1]), max(dict_traj[key+1][1])]) startstop[key] = np.array([min(dict_traj[key+1][1]), max(dict_traj[key+1][1])])
print("4")
# f = open(os.path.join(save_f, audio_paths[file].split('/')[-1][:-4] + ".json"), "w") f = open(os.path.join(save_f, audio_paths[file].split('/')[-1][:-4] + ".json"), "w")
# json.dump(dict_traj, f, indent=4) json.dump(dict_traj, f, indent=4)
# f.close() f.close()
print(f"\r\tFile {file+1} on {len(audio_paths)}: found {len(values)} whistles", end='\r') print(f"\r\tFile {file+1} on {len(audio_paths)}: found {len(values)} whistles", end='\r')
print("\nDetection of whistles finished!") print("\nDetection of whistles finished!")
\ No newline at end of file
#%% Display the beautiful selection
final_traj[final_traj != 0] = 1
#harmonized_traj[harmonized_traj != 0] = 1
# colors to differenciate detected trajectories
prism = cm.get_cmap('prism', 256)
newcolors = prism(np.linspace(0, 1, np.unique(harmonized_traj).shape[0]))
pink = np.array([0/256, 0/256, 0/256, 1])
newcolors[0, :] = pink
newcmp = ListedColormap(newcolors)
a = plot_spectrums([amplitude_to_db(spectre), max_loc_per_bin_check1, final_traj, harmonized_traj],
['gray_r', 'gray', 'gray', newcmp],
titles=['Spectrogram (dB scale)', 'Local maxima selection', 'Extraction of continuous trajectories',
'Exclusion of harmonics'],
ylabels=["Frequency"]*4,
bins=375, title="")
plt.show(block=True)
\ No newline at end of file
Whistles/2-get_stats_of_whistles.py
+ 2
− 3
View file @ 9d300058
...@@ -22,10 +22,9 @@ print("Importation of packages complete!") ...@@ -22,10 +22,9 @@ print("Importation of packages complete!")
#%% Parameters #%% Parameters
print("\rSetting up parameters...", end="\r") print("\rSetting up parameters...", end="\r")
audio_f = "./../Audio_data" # Path to recordings
csv_f = "./../CSV_data" # Path to data in csv csv_f = "./../CSV_data" # Path to data in csv
save_f = "./Trajectories" # Path were save_f = "./Trajectories" # Path were trajectories are stored
results_f = "./Evaluation" results_f = "./Evaluation" # Path were results are stored
keep_if = 1 # minimal length of a whistle to be kept keep_if = 1 # minimal length of a whistle to be kept
print("Parameters ready to use!") print("Parameters ready to use!")
......
Whistles/WhistleUtils.py
+ 2
− 2
View file @ 9d300058
...@@ -83,9 +83,9 @@ def get_csv(csv_folder, slash="\\"): ...@@ -83,9 +83,9 @@ def get_csv(csv_folder, slash="\\"):
csv_names = [a for a in os.listdir(csv_folder) if a.endswith('.csv')] csv_names = [a for a in os.listdir(csv_folder) if a.endswith('.csv')]
# import data # import data
data = import_csv(csv_names[0], csv_folder, separator=slash) data = import_csv(csv_names[0], csv_folder, slash=slash)
for i in range(1,len(csv_names)): for i in range(1,len(csv_names)):
data = data + import_csv(csv_names[i], csv_folder, separator=slash)[1:] data = data + import_csv(csv_names[i], csv_folder, slash=slash)[1:]
data_frame = pd.DataFrame(data=data[:][1:], columns=data[:][0]) data_frame = pd.DataFrame(data=data[:][1:], columns=data[:][0])
# change dtype for selected columns # change dtype for selected columns
......
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