From d0e487aa9c8059b71a2709f1e4e38d09192ce7fd Mon Sep 17 00:00:00 2001
From: Baptiste Bauvin <baptiste.bauvin@lis-lab.fr>
Date: Wed, 1 Feb 2023 09:20:18 -0500
Subject: [PATCH] Feat importance
---
.../result_analysis/feature_importances.py | 6 +++++-
summit/multiview_platform/utils/compression.py | 12 +++++++-----
2 files changed, 12 insertions(+), 6 deletions(-)
diff --git a/summit/multiview_platform/result_analysis/feature_importances.py b/summit/multiview_platform/result_analysis/feature_importances.py
index 9a515277..50e5e2c6 100644
--- a/summit/multiview_platform/result_analysis/feature_importances.py
+++ b/summit/multiview_platform/result_analysis/feature_importances.py
@@ -31,8 +31,13 @@ def get_feature_importances(result, feature_ids=None, view_names=None,):
index=feature_ids[classifier_result.view_index])
if hasattr(classifier_result.clf, 'feature_importances_'):
print(classifier_result.classifier_name, classifier_result.view_name)
+
feature_importances[classifier_result.view_name][
classifier_result.classifier_name] = classifier_result.clf.feature_importances_
+ print(classifier_result.clf.feature_importances_.shape,
+ feature_importances[classifier_result.view_name][
+ classifier_result.classifier_name].shape)
+
else:
feature_importances[classifier_result.view_name][
classifier_result.classifier_name] = np.zeros(
@@ -149,7 +154,6 @@ def plot_feature_relevance(file_name, feature_importance,
if isinstance(score_df, dict):
score_df = score_df["mean"]
for score in score_df.columns:
- print(score)
if len(score.split("-"))>1:
algo, view = score.split("-")
list_ind = [ind for ind in feature_importance.index if ind.startswith(view)]
diff --git a/summit/multiview_platform/utils/compression.py b/summit/multiview_platform/utils/compression.py
index 4af07e0a..24b0ebc7 100644
--- a/summit/multiview_platform/utils/compression.py
+++ b/summit/multiview_platform/utils/compression.py
@@ -43,9 +43,11 @@ def remove_compressed(exp_path):
if __name__=="__main__":
- for dir in os.listdir("/home/baptiste/Documents/Gitwork/summit/results/"):
- print(dir)
- for exp in os.listdir((os.path.join("/home/baptiste/Documents/Gitwork/summit/results/", dir))):
- print("\t", exp)
- explore_files(os.path.join("/home/baptiste/Documents/Gitwork/summit/results/", dir, exp))
+ # for dir in os.listdir("/home/baptiste/Documents/Gitwork/summit/results/"):
+ # print(dir)
+ # for exp in os.listdir((os.path.join("/home/baptiste/Documents/Gitwork/summit/results/", dir))):
+ # print("\t", exp)
+ # explore_files(os.path.join("/home/baptiste/Documents/Gitwork/summit/results/", dir, exp))
+ explore_files(
+ os.path.join("/home/baptiste/Documents/Gitwork/summit/results/", "mage_dset", "debug_started_2022_12_13-10_15_20_th"))
# simplify_plotly("/home//baptiste/Documents/Gitwork/summit/results/hepatitis/debug_started_2022_03_16-15_06_55__/hepatitis-mean_on_10_iter-balanced_accuracy_p.html")
--
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