From cc6d5e8b593db879666fa9c8772be51ec9d6bafb Mon Sep 17 00:00:00 2001
From: Baptiste Bauvin <baptiste.bauvin@lis-lab.fr>
Date: Mon, 21 Mar 2022 11:09:14 -0400
Subject: [PATCH] Ordered feat_imp
---
.../result_analysis/feature_importances.py | 18 ++++++++++--------
1 file changed, 10 insertions(+), 8 deletions(-)
diff --git a/summit/multiview_platform/result_analysis/feature_importances.py b/summit/multiview_platform/result_analysis/feature_importances.py
index 088cd830..5e58b263 100644
--- a/summit/multiview_platform/result_analysis/feature_importances.py
+++ b/summit/multiview_platform/result_analysis/feature_importances.py
@@ -67,17 +67,17 @@ def publish_feature_importances(feature_importances, directory, database_name,
importance_dfs.append(feature_importance.set_index(pd.Index([view_name+"-"+ind for ind in list(feature_importance.index)])))
- importance_dfs.append(pd.DataFrame(index=[view_name+"-br"],
- columns=feature_importance.columns,
- data=np.zeros((1, len(
- feature_importance.columns)))))
+ # importance_dfs.append(pd.DataFrame(index=[view_name+"-br"],
+ # columns=feature_importance.columns,
+ # data=np.zeros((1, len(
+ # feature_importance.columns)))))
std_dfs.append(feature_std.set_index(pd.Index([view_name+"-"+ind
for ind
in list(feature_std.index)])))
- std_dfs.append(pd.DataFrame(index=[view_name + "-br"],
- columns=feature_std.columns,
- data=np.zeros((1, len(
- feature_std.columns)))))
+ # std_dfs.append(pd.DataFrame(index=[view_name + "-br"],
+ # columns=feature_std.columns,
+ # data=np.zeros((1, len(
+ # feature_std.columns)))))
if len(importance_dfs)>0:
feature_importances_df = pd.concat(importance_dfs[:-1])
feature_importances_df = feature_importances_df/feature_importances_df.sum(axis=0)
@@ -98,6 +98,8 @@ def publish_feature_importances(feature_importances, directory, database_name,
def plot_feature_importances(file_name, feature_importance,
feature_std): # pragma: no cover
+ s = feature_importance.sum(axis=1)
+ feature_importance = feature_importance.loc[s.sort_values(ascending=False).index]
feature_importance.to_csv(file_name + "_dataframe.csv")
hover_text = [["-Feature :" + str(feature_name) +
"<br>-Classifier : " + classifier_name +
--
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