From 6b8a17da0a37333dc1917e4ee7ce4e64090954b1 Mon Sep 17 00:00:00 2001
From: bbauvin <baptiste.bauvin@centrale-marseille.fr>
Date: Wed, 18 Oct 2017 09:48:38 -0400
Subject: [PATCH] Trying to get imports to work
---
Code/Exec.py | 2 +-
.../ExecClassif.py | 23 +++++++++---------
.../Metrics/__init__.py | 0
.../Metrics/accuracy_score.py | 0
.../Metrics/f1_score.py | 0
.../Metrics/fbeta_score.py | 0
.../Metrics/hamming_loss.py | 0
.../Metrics/jaccard_similarity_score.py | 0
.../Metrics/log_loss.py | 0
.../Metrics/matthews_corrcoef.py | 0
.../Metrics/precision_score.py | 0
.../Metrics/recall_score.py | 0
.../Metrics/roc_auc_score.py | 0
.../Metrics/zero_one_loss.py | 0
.../Monoview/ExecClassifMonoView.py | 2 +-
.../Monoview/ExecPlot.py | 2 +-
.../Monoview/ExportResults.py | 2 +-
.../Monoview/MonoviewUtils.py | 0
...2016_08_19-CMV-MultiOmicDataset-RNASeq.csv | 0
.../2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv | 0
...16_03_24-CMV-Caltech-HOG-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-HOG-LOG.log | 0
.../2016_03_24-CMV-Caltech-HOG-Report.csv | 0
.../2016_03_24-CMV-Caltech-HOG-Score.png | Bin
.../2016_03_24-CMV-Caltech-HOG-Stats.csv | 0
.../2016_03_24-CMV-Caltech-HOG.csv | 0
.../2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv | 0
...16_03_24-CMV-Caltech-HSV-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-HSV-LOG.log | 0
.../2016_03_24-CMV-Caltech-HSV-Report.csv | 0
.../2016_03_24-CMV-Caltech-HSV-Score.png | Bin
.../2016_03_24-CMV-Caltech-HSV-Stats.csv | 0
.../2016_03_24-CMV-Caltech-HSV.csv | 0
.../2016_03_24-CMV-Caltech-RGB-ConfMatrix.csv | 0
...16_03_24-CMV-Caltech-RGB-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-RGB-LOG.log | 0
.../2016_03_24-CMV-Caltech-RGB-Report.csv | 0
.../2016_03_24-CMV-Caltech-RGB-Score.png | Bin
.../2016_03_24-CMV-Caltech-RGB-Stats.csv | 0
.../2016_03_24-CMV-Caltech-RGB.csv | 0
.../2016_03_24-CMV-Caltech-RGB-ConfMatrix.csv | 0
...16_03_24-CMV-Caltech-RGB-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-RGB-LOG.log | 0
.../2016_03_24-CMV-Caltech-RGB-Report.csv | 0
.../2016_03_24-CMV-Caltech-RGB-Score.png | Bin
.../2016_03_24-CMV-Caltech-RGB-Stats.csv | 0
.../2016_03_24-CMV-Caltech-RGB.csv | 0
...2016_03_24-CMV-Caltech-SIFT-ConfMatrix.csv | 0
...6_03_24-CMV-Caltech-SIFT-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-SIFT-LOG.log | 0
.../2016_03_24-CMV-Caltech-SIFT-Report.csv | 0
.../2016_03_24-CMV-Caltech-SIFT-Score.png | Bin
.../2016_03_24-CMV-Caltech-SIFT-Stats.csv | 0
.../2016_03_24-CMV-Caltech-SIFT.csv | 0
...2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv | 0
...6_03_24-CMV-Caltech-SURF-ConfMatrixImg.png | Bin
.../2016_03_24-CMV-Caltech-SURF-LOG.log | 0
.../2016_03_24-CMV-Caltech-SURF-Report.csv | 0
.../2016_03_24-CMV-Caltech-SURF-Score.png | Bin
.../2016_03_24-CMV-Caltech-SURF-Stats.csv | 0
.../2016_03_24-CMV-Caltech-SURF.csv | 0
.../Monoview/__init__.py | 0
.../Monoview/analyzeResult.py | 0
.../Monoview/run.py | 0
.../MonoviewClassifiers/Adaboost.py | 0
.../MonoviewClassifiers/DecisionTree.py | 0
.../MonoviewClassifiers/KNN.py | 0
.../MonoviewClassifiers/RandomForest.py | 0
.../MonoviewClassifiers/SCM.py | 0
.../MonoviewClassifiers/SGD.py | 0
.../MonoviewClassifiers/SVMLinear.py | 0
.../MonoviewClassifiers/SVMPoly.py | 0
.../MonoviewClassifiers/SVMRBF.py | 0
.../MonoviewClassifiers/__init__.py | 0
.../Multiview/ExecMultiview.py | 15 +++++++++---
.../Multiview/Fusion/Fusion.py | 15 +++++++-----
.../Multiview/Fusion/Methods/EarlyFusion.py | 0
.../EarlyFusionPackage/WeightedLinear.py | 0
.../Methods/EarlyFusionPackage/__init__.py | 0
.../Multiview/Fusion/Methods/LateFusion.py | 0
.../LateFusionPackage/BayesianInference.py | 4 +--
.../LateFusionPackage/MajorityVoting.py | 11 +++++----
.../Methods/LateFusionPackage/SCMForLinear.py | 6 ++---
.../Methods/LateFusionPackage/SVMForLinear.py | 7 +++---
.../LateFusionPackage/WeightedLinear.py | 7 +++---
.../Methods/LateFusionPackage/__init__.py | 0
.../Multiview/Fusion/Methods/__init__.py | 0
.../Multiview/Fusion/__init__.py | 0
.../Multiview/Fusion/analyzeResults.py | 2 +-
.../Multiview/GetMultiviewDb.py | 0
.../Mumbo/Classifiers/DecisionTree.py | 0
.../Multiview/Mumbo/Classifiers/Kover.py | 0
.../Mumbo/Classifiers/ModifiedMulticlass.py | 0
.../Mumbo/Classifiers/SubSampling.py | 0
.../Multiview/Mumbo/Classifiers/__init__.py | 0
.../Multiview/Mumbo/Mumbo.py | 2 +-
.../Multiview/Mumbo/__init__.py | 0
.../Multiview/Mumbo/analyzeResults.py | 1 -
.../Multiview/__init__.py | 8 ++++++
.../Multiview/profile | Bin
.../Multiview/res | 0
.../Multiview/run.py | 0
.../ResultAnalysis.py | 8 +++---
.../Versions.py | 0
.../__init__.py | 0
.../temp_scm_fusion | Bin
.../test.png | Bin
.../utils/Dataset.py | 0
.../utils/HyperParameterSearch.py | 0
.../utils/Transformations.py | 0
.../utils/__init__.py | 0
.../utils/execution.py | 0
.../Multiview/__init__.py | 7 ------
Code/__init__.py | 2 +-
114 files changed, 69 insertions(+), 57 deletions(-)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/ExecClassif.py (96%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/accuracy_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/f1_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/fbeta_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/hamming_loss.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/jaccard_similarity_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/log_loss.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/matthews_corrcoef.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/precision_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/recall_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/roc_auc_score.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Metrics/zero_one_loss.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/ExecClassifMonoView.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/ExecPlot.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/ExportResults.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/MonoviewUtils.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/2016_08_19-CMV-MultiOmicDataset-RNASeq.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-3classes-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrixImg.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-LOG.log (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Report.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Score.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Stats.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF.csv (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/analyzeResult.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Monoview/run.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/Adaboost.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/DecisionTree.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/KNN.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/RandomForest.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/SCM.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/SGD.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/SVMLinear.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/SVMPoly.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/SVMRBF.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/MonoviewClassifiers/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/ExecMultiview.py (87%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Fusion.py (93%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/EarlyFusion.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/EarlyFusionPackage/WeightedLinear.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/EarlyFusionPackage/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusion.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py (98%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py (97%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py (98%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py (98%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/LateFusionPackage/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/Methods/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Fusion/analyzeResults.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/GetMultiviewDb.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Classifiers/DecisionTree.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Classifiers/Kover.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Classifiers/ModifiedMulticlass.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Classifiers/SubSampling.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Classifiers/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/Mumbo.py (99%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/Mumbo/analyzeResults.py (99%)
create mode 100644 Code/MonoMultiViewClassifiers/Multiview/__init__.py
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/profile (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/res (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Multiview/run.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/ResultAnalysis.py (98%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/Versions.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/temp_scm_fusion (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/test.png (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/utils/Dataset.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/utils/HyperParameterSearch.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/utils/Transformations.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/utils/__init__.py (100%)
rename Code/{MonoMutliViewClassifiers => MonoMultiViewClassifiers}/utils/execution.py (100%)
delete mode 100644 Code/MonoMutliViewClassifiers/Multiview/__init__.py
diff --git a/Code/Exec.py b/Code/Exec.py
index f4a06d2f..77d1921f 100644
--- a/Code/Exec.py
+++ b/Code/Exec.py
@@ -1,5 +1,5 @@
import sys
-from MonoMutliViewClassifiers import ExecClassif
+from MonoMultiViewClassifiers import ExecClassif
ExecClassif.execClassif(sys.argv[1:])
diff --git a/Code/MonoMutliViewClassifiers/ExecClassif.py b/Code/MonoMultiViewClassifiers/ExecClassif.py
similarity index 96%
rename from Code/MonoMutliViewClassifiers/ExecClassif.py
rename to Code/MonoMultiViewClassifiers/ExecClassif.py
index ed53a1f4..9e172a8c 100644
--- a/Code/MonoMutliViewClassifiers/ExecClassif.py
+++ b/Code/MonoMultiViewClassifiers/ExecClassif.py
@@ -2,7 +2,7 @@
import pkgutil # for TimeStamp in CSVFile
import os
import time
-import sys
+# import sys
import logging
import errno
@@ -11,24 +11,24 @@ from joblib import Parallel, delayed
import numpy as np
import math
import matplotlib
+matplotlib.use('Agg') # Anti-Grain Geometry C++ library to make a raster (pixel) image of the figure
import h5py
# Import own modules
from . import Multiview
# import Metrics
-import MonoviewClassifiers
-from Multiview.ExecMultiview import ExecMultiview, ExecMultiview_multicore
-from Monoview.ExecClassifMonoView import ExecMonoview, ExecMonoview_multicore
-import Multiview.GetMultiviewDb as DB
+from . import MonoviewClassifiers
+from .Multiview.ExecMultiview import ExecMultiview, ExecMultiview_multicore
+from .Monoview.ExecClassifMonoView import ExecMonoview, ExecMonoview_multicore
+from .Multiview import GetMultiviewDb as DB
from Versions import testVersions
from ResultAnalysis import resultAnalysis, analyzeLabels, analyzeIterResults
-from utils import execution, Dataset
+from .utils import execution, Dataset
# Author-Info
__author__ = "Baptiste Bauvin"
__status__ = "Prototype" # Production, Development, Prototype
-# matplotlib.use('Agg') # Anti-Grain Geometry C++ library to make a raster (pixel) image of the figure
def initBenchmark(args):
@@ -37,11 +37,11 @@ def initBenchmark(args):
args.FU_early_methods, args.CL_algos_monoview"""
benchmark = {"Monoview": {}, "Multiview": {}}
allMultiviewPackages = [name for _, name, isPackage
- in pkgutil.iter_modules(['Multiview/']) if isPackage]
+ in pkgutil.iter_modules(['./MonoMultiViewClassifiers/Multiview/']) if isPackage]
if args.CL_type == ["Benchmark"]:
allMonoviewAlgos = [name for _, name, isPackage in
- pkgutil.iter_modules(['MonoviewClassifiers'])
+ pkgutil.iter_modules(['./MonoMultiViewClassifiers/MonoviewClassifiers'])
if (not isPackage)]
benchmark["Monoview"] = allMonoviewAlgos
benchmark["Multiview"] = dict((multiviewPackageName, "_") for multiviewPackageName in allMultiviewPackages)
@@ -63,7 +63,7 @@ def initBenchmark(args):
benchmark = multiviewModule.getBenchmark(benchmark, args=args)
if "Monoview" in args.CL_type:
if args.CL_algos_monoview == ['']:
- benchmark["Monoview"] = [name for _, name, isPackage in pkgutil.iter_modules(["MonoviewClassifiers"])
+ benchmark["Monoview"] = [name for _, name, isPackage in pkgutil.iter_modules(["./MonoMultiViewClassifiers/MonoviewClassifiers"])
if not isPackage]
else:
@@ -200,7 +200,6 @@ def classifyOneIter_multicore(LABELS_DICTIONARY, argumentDictionaries, nbCores,
def classifyOneIter(LABELS_DICTIONARY, argumentDictionaries, nbCores, directory, args, classificationIndices, kFolds,
randomState, hyperParamSearch, metrics, DATASET, viewsIndices, dataBaseTime, start,
benchmark, views):
- print classificationIndices[0]
np.savetxt(directory + "train_indices.csv", classificationIndices[0], delimiter=",")
resultsMonoview = []
@@ -318,7 +317,7 @@ def execClassif(arguments):
metrics = [metric.split(":") for metric in args.CL_metrics]
if metrics == [[""]]:
metricsNames = [name for _, name, isPackage
- in pkgutil.iter_modules(['Metrics']) if not isPackage and name != "log_loss"]
+ in pkgutil.iter_modules(['./MonoMultiViewClassifiers/Metrics']) if not isPackage and name != "log_loss"]
metrics = [[metricName] for metricName in metricsNames]
metrics = arangeMetrics(metrics, args.CL_metric_princ)
for metricIndex, metric in enumerate(metrics):
diff --git a/Code/MonoMutliViewClassifiers/Metrics/__init__.py b/Code/MonoMultiViewClassifiers/Metrics/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/__init__.py
rename to Code/MonoMultiViewClassifiers/Metrics/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/accuracy_score.py b/Code/MonoMultiViewClassifiers/Metrics/accuracy_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/accuracy_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/accuracy_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/f1_score.py b/Code/MonoMultiViewClassifiers/Metrics/f1_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/f1_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/f1_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/fbeta_score.py b/Code/MonoMultiViewClassifiers/Metrics/fbeta_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/fbeta_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/fbeta_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/hamming_loss.py b/Code/MonoMultiViewClassifiers/Metrics/hamming_loss.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/hamming_loss.py
rename to Code/MonoMultiViewClassifiers/Metrics/hamming_loss.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/jaccard_similarity_score.py b/Code/MonoMultiViewClassifiers/Metrics/jaccard_similarity_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/jaccard_similarity_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/jaccard_similarity_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/log_loss.py b/Code/MonoMultiViewClassifiers/Metrics/log_loss.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/log_loss.py
rename to Code/MonoMultiViewClassifiers/Metrics/log_loss.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/matthews_corrcoef.py b/Code/MonoMultiViewClassifiers/Metrics/matthews_corrcoef.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/matthews_corrcoef.py
rename to Code/MonoMultiViewClassifiers/Metrics/matthews_corrcoef.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/precision_score.py b/Code/MonoMultiViewClassifiers/Metrics/precision_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/precision_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/precision_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/recall_score.py b/Code/MonoMultiViewClassifiers/Metrics/recall_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/recall_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/recall_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/roc_auc_score.py b/Code/MonoMultiViewClassifiers/Metrics/roc_auc_score.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/roc_auc_score.py
rename to Code/MonoMultiViewClassifiers/Metrics/roc_auc_score.py
diff --git a/Code/MonoMutliViewClassifiers/Metrics/zero_one_loss.py b/Code/MonoMultiViewClassifiers/Metrics/zero_one_loss.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Metrics/zero_one_loss.py
rename to Code/MonoMultiViewClassifiers/Metrics/zero_one_loss.py
diff --git a/Code/MonoMutliViewClassifiers/Monoview/ExecClassifMonoView.py b/Code/MonoMultiViewClassifiers/Monoview/ExecClassifMonoView.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Monoview/ExecClassifMonoView.py
rename to Code/MonoMultiViewClassifiers/Monoview/ExecClassifMonoView.py
index f33b2be2..312f4fe4 100644
--- a/Code/MonoMutliViewClassifiers/Monoview/ExecClassifMonoView.py
+++ b/Code/MonoMultiViewClassifiers/Monoview/ExecClassifMonoView.py
@@ -15,7 +15,7 @@ import logging # To create Log-Files
import h5py
# Import own modules
-import MonoviewClassifiers
+from .. import MonoviewClassifiers
from analyzeResult import execute
from ..utils.Dataset import getValue, extractSubset
diff --git a/Code/MonoMutliViewClassifiers/Monoview/ExecPlot.py b/Code/MonoMultiViewClassifiers/Monoview/ExecPlot.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Monoview/ExecPlot.py
rename to Code/MonoMultiViewClassifiers/Monoview/ExecPlot.py
index 97262a72..637cb4ed 100644
--- a/Code/MonoMutliViewClassifiers/Monoview/ExecPlot.py
+++ b/Code/MonoMultiViewClassifiers/Monoview/ExecPlot.py
@@ -8,7 +8,7 @@ import datetime # for TimeStamp in CSVFile
import os # to geth path of the running script
import matplotlib
-matplotlib.use('Agg')
+# matplotlib.use('Agg')
# Import 3rd party modules
import pandas as pd # for Series
import numpy as np # for DataFrames
diff --git a/Code/MonoMutliViewClassifiers/Monoview/ExportResults.py b/Code/MonoMultiViewClassifiers/Monoview/ExportResults.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Monoview/ExportResults.py
rename to Code/MonoMultiViewClassifiers/Monoview/ExportResults.py
index a3cb7117..7df50125 100644
--- a/Code/MonoMutliViewClassifiers/Monoview/ExportResults.py
+++ b/Code/MonoMultiViewClassifiers/Monoview/ExportResults.py
@@ -13,7 +13,7 @@ import matplotlib.pyplot as plt # for Plots
from scipy.interpolate import interp1d # to Interpolate Data
import matplotlib
-matplotlib.use('Agg')
+# matplotlib.use('Agg')
from matplotlib.offsetbox import AnchoredOffsetbox, TextArea, HPacker # to generate the Annotations in plot
from pylab import rcParams # to change size of plot
from sklearn import metrics # For stastics on classification
diff --git a/Code/MonoMutliViewClassifiers/Monoview/MonoviewUtils.py b/Code/MonoMultiViewClassifiers/Monoview/MonoviewUtils.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/MonoviewUtils.py
rename to Code/MonoMultiViewClassifiers/Monoview/MonoviewUtils.py
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/2016_08_19-CMV-MultiOmicDataset-RNASeq.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/2016_08_19-CMV-MultiOmicDataset-RNASeq.csv
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/2016_08_19-CMV-MultiOmicDataset-RNASeq.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/2016_08_19-CMV-MultiOmicDataset-RNASeq.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrix.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrixImg.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrixImg.png
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrixImg.png
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-ConfMatrixImg.png
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-LOG.log b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-LOG.log
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-LOG.log
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-LOG.log
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Report.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Report.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Report.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Report.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Score.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Score.png
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Score.png
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Score.png
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Stats.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Stats.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Stats.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG-Stats.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HOG-Cluster_20/2016_03_24-CMV-Caltech-HOG.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrix.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrixImg.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-ConfMatrixImg.png
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Report.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Report.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Score.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV-Score.png
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/HSV-Bins_[16,16,16]/2016_03_24-CMV-Caltech-HSV.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Score.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/RGB-Bins_16-CI_256/2016_03_24-CMV-Caltech-RGB-Score.png
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrix.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrix.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrix.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrixImg.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-ConfMatrixImg.png
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Report.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Report.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Report.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Score.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Score.png
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Stats.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Stats.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT-Stats.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SIFT-Cluster_35/2016_03_24-CMV-Caltech-SIFT.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrix.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrixImg.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrixImg.png
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrixImg.png
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-ConfMatrixImg.png
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-LOG.log b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-LOG.log
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-LOG.log
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-LOG.log
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Report.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Report.csv
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diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Score.png b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Score.png
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rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Score.png
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Stats.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Stats.csv
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rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF-Stats.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF.csv b/Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF.csv
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rename from Code/MonoMutliViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF.csv
rename to Code/MonoMultiViewClassifiers/Monoview/Results-ClassMonoView/SURF-Cluster_30/2016_03_24-CMV-Caltech-SURF.csv
diff --git a/Code/MonoMutliViewClassifiers/Monoview/__init__.py b/Code/MonoMultiViewClassifiers/Monoview/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/__init__.py
rename to Code/MonoMultiViewClassifiers/Monoview/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Monoview/analyzeResult.py b/Code/MonoMultiViewClassifiers/Monoview/analyzeResult.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/analyzeResult.py
rename to Code/MonoMultiViewClassifiers/Monoview/analyzeResult.py
diff --git a/Code/MonoMutliViewClassifiers/Monoview/run.py b/Code/MonoMultiViewClassifiers/Monoview/run.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Monoview/run.py
rename to Code/MonoMultiViewClassifiers/Monoview/run.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/Adaboost.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/Adaboost.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/Adaboost.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/Adaboost.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/DecisionTree.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/DecisionTree.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/DecisionTree.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/DecisionTree.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/KNN.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/KNN.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/KNN.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/KNN.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/RandomForest.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/RandomForest.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/RandomForest.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/RandomForest.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/SCM.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/SCM.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/SCM.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/SCM.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/SGD.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/SGD.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/SGD.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/SGD.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMLinear.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMLinear.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMLinear.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMLinear.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMPoly.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMPoly.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMPoly.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMPoly.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMRBF.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMRBF.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/SVMRBF.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/SVMRBF.py
diff --git a/Code/MonoMutliViewClassifiers/MonoviewClassifiers/__init__.py b/Code/MonoMultiViewClassifiers/MonoviewClassifiers/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/MonoviewClassifiers/__init__.py
rename to Code/MonoMultiViewClassifiers/MonoviewClassifiers/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/ExecMultiview.py b/Code/MonoMultiViewClassifiers/Multiview/ExecMultiview.py
similarity index 87%
rename from Code/MonoMutliViewClassifiers/Multiview/ExecMultiview.py
rename to Code/MonoMultiViewClassifiers/Multiview/ExecMultiview.py
index bdeb42cf..ef27e9f9 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/ExecMultiview.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/ExecMultiview.py
@@ -7,10 +7,11 @@ import os
import logging
import time
import h5py
+import imp
from ..utils.Dataset import getShape
from ..utils import HyperParameterSearch
-import Multiview
+# from . import *
# Author-Info
__author__ = "Baptiste Bauvin"
@@ -50,10 +51,16 @@ def ExecMultiview(directory, DATASET, name, classificationIndices, KFolds, nbCor
extractionTime = time.time() - t_start
learningIndices, validationIndices = classificationIndices
- classifierPackage = getattr(Multiview, CL_type) # Permet d'appeler un module avec une string
- classifierModule = getattr(classifierPackage, CL_type)
+ packageDirectories = [entry for entry in os.listdir("MonoMultiViewClassifiers/Multiview/") if os.path.isdir("MonoMultiViewClassifiers/Multiview/"+entry)]
+ for packageDirectory in packageDirectories:
+ if packageDirectory == CL_type:
+ classifierModule = imp.load_source(CL_type, "MonoMultiViewClassifiers/Multiview/"+packageDirectory+"/"+CL_type+".py")
+ analysisModule = imp.load_source(CL_type, "MonoMultiViewClassifiers/Multiview/"+packageDirectory+"/analyzeResults.py")
+ import pdb; pdb.set_trace()
+ # classifierPackage = getattr(locals(), CL_type) # Permet d'appeler un module avec une string
+ # classifierModule = getattr(classifierPackage, CL_type)
classifierClass = getattr(classifierModule, CL_type)
- analysisModule = getattr(classifierPackage, "analyzeResults")
+ # analysisModule = getattr(classifierPackage, "analyzeResults")
if hyperParamSearch != "None":
classifier = HyperParameterSearch.searchBestSettings(DATASET, classifierModule, CL_type, metrics, learningIndices, KFolds, randomState,
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Fusion.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Fusion.py
similarity index 93%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Fusion.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Fusion.py
index d0326b60..c6442c56 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Fusion.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Fusion.py
@@ -2,7 +2,10 @@ import numpy as np
import logging
import pkgutil
+# from Methods import *
+import pdb;pdb.set_trace()
import Methods
+
from ... import MonoviewClassifiers
from ...utils.Dataset import getV
@@ -13,19 +16,19 @@ __status__ = "Prototype" # Production, Development, Prototype
def getBenchmark(benchmark, args=None):
fusionModulesNames = [name for _, name, isPackage
- in pkgutil.iter_modules(['Multiview/Fusion/Methods']) if not isPackage]
+ in pkgutil.iter_modules(['./MonoMultiViewClassifiers/Multiview/Fusion/Methods']) if not isPackage]
fusionModules = [getattr(Methods, fusionModulesName)
for fusionModulesName in fusionModulesNames]
fusionClassifiers = [getattr(fusionModule, fusionModulesName + "Classifier")
for fusionModulesName, fusionModule in zip(fusionModulesNames, fusionModules)]
fusionMethods = dict((fusionModulesName, [name for _, name, isPackage in
pkgutil.iter_modules(
- ["Multiview/Fusion/Methods/" + fusionModulesName + "Package"])
+ ["./MonoMultiViewClassifiers/Multiview/Fusion/Methods/" + fusionModulesName + "Package"])
if not isPackage])
for fusionModulesName, fusionClasse in zip(fusionModulesNames, fusionClassifiers))
if args is None:
allMonoviewAlgos = [name for _, name, isPackage in
- pkgutil.iter_modules(['MonoviewClassifiers'])
+ pkgutil.iter_modules(['./MonoMultiViewClassifiers/MonoviewClassifiers'])
if (not isPackage)]
fusionMonoviewClassifiers = allMonoviewAlgos
allFusionAlgos = {"Methods": fusionMethods, "Classifiers": fusionMonoviewClassifiers}
@@ -42,7 +45,7 @@ def getBenchmark(benchmark, args=None):
if args.FU_late_methods == [""]:
benchmark["Multiview"]["Fusion"]["Methods"]["LateFusion"] = [name for _, name, isPackage in
pkgutil.iter_modules([
- "Multiview/Fusion/Methods/LateFusionPackage"])
+ "./MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage"])
if not isPackage]
else:
benchmark["Multiview"]["Fusion"]["Methods"]["LateFusion"] = args.FU_late_methods
@@ -50,13 +53,13 @@ def getBenchmark(benchmark, args=None):
if args.FU_early_methods == [""]:
benchmark["Multiview"]["Fusion"]["Methods"]["EarlyFusion"] = [name for _, name, isPackage in
pkgutil.iter_modules([
- "Multiview/Fusion/Methods/EarlyFusionPackage"])
+ "./MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage"])
if not isPackage]
else:
benchmark["Multiview"]["Fusion"]["Methods"]["EarlyFusion"] = args.FU_early_methods
if args.CL_algos_monoview == ['']:
benchmark["Multiview"]["Fusion"]["Classifiers"] = [name for _, name, isPackage in
- pkgutil.iter_modules(['MonoviewClassifiers'])
+ pkgutil.iter_modules(['./MonoMultiViewClassifiers/MonoviewClassifiers'])
if (not isPackage) and (name != "SGD") and (
name[:3] != "SVM")
and (name != "SCM")]
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusion.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusion.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusion.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusion.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/WeightedLinear.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/WeightedLinear.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/WeightedLinear.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/WeightedLinear.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/EarlyFusionPackage/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusion.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusion.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusion.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusion.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py
similarity index 98%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py
index 7940938d..41f992b0 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/BayesianInference.py
@@ -2,8 +2,8 @@ import numpy as np
from sklearn.metrics import accuracy_score
import pkgutil
-from utils.Dataset import getV
-import MonoviewClassifiers
+from .....utils.Dataset import getV
+from ..... import MonoviewClassifiers
from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py
similarity index 97%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py
index 4f70dcde..77986387 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/MajorityVoting.py
@@ -1,9 +1,10 @@
-from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
-import MonoviewClassifiers
import numpy as np
-from sklearn.metrics import accuracy_score
-from utils.Dataset import getV
-import pkgutil
+# from sklearn.metrics import accuracy_score
+# import pkgutil
+
+from .....utils.Dataset import getV
+from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
+from ..... import MonoviewClassifiers
def genParamsSets(classificationKWARGS, randomState, nIter=1):
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py
index 510e26a8..ad35ce1e 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SCMForLinear.py
@@ -1,9 +1,6 @@
-from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
-import MonoviewClassifiers
import numpy as np
import pyscm
from pyscm.utils import _pack_binary_bytes_to_ints
-from utils.Dataset import getV
import os
import h5py
from pyscm.binary_attributes.classifications.popcount import inplace_popcount_32, inplace_popcount_64
@@ -14,6 +11,9 @@ from sklearn.metrics import accuracy_score
import itertools
import pkgutil
+from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
+from ..... import MonoviewClassifiers
+from .....utils.Dataset import getV
def genParamsSets(classificationKWARGS, randomState, nIter=1):
nbView = classificationKWARGS["nbView"]
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py
similarity index 98%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py
index 5a0b23f9..8259b53c 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/SVMForLinear.py
@@ -1,11 +1,12 @@
-from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
-import MonoviewClassifiers
import numpy as np
from sklearn.multiclass import OneVsOneClassifier
from sklearn.svm import SVC
-from utils.Dataset import getV
import pkgutil
+from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
+from .....utils.Dataset import getV
+from ..... import MonoviewClassifiers
+
def genParamsSets(classificationKWARGS, randomState, nIter=1):
paramsSets = []
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py
similarity index 98%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py
index 7e03342f..24de1714 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/WeightedLinear.py
@@ -1,10 +1,11 @@
-from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
-import MonoviewClassifiers
import numpy as np
from sklearn.metrics import accuracy_score
-from utils.Dataset import getV
import pkgutil
+from ..... import MonoviewClassifiers
+from ..LateFusion import LateFusionClassifier, getClassifiers, getConfig
+from .....utils.Dataset import getV
+
def genParamsSets(classificationKWARGS, randomState, nIter=1):
nbView = classificationKWARGS["nbView"]
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/LateFusionPackage/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/Methods/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/Methods/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Fusion/analyzeResults.py b/Code/MonoMultiViewClassifiers/Multiview/Fusion/analyzeResults.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Multiview/Fusion/analyzeResults.py
rename to Code/MonoMultiViewClassifiers/Multiview/Fusion/analyzeResults.py
index a11a899a..05526fdb 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Fusion/analyzeResults.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Fusion/analyzeResults.py
@@ -2,7 +2,7 @@ from sklearn.metrics import precision_recall_fscore_support, accuracy_score, cla
import numpy as np
import matplotlib
-matplotlib.use('Agg')
+# matplotlib.use('Agg')
import operator
import Methods.LateFusion
from ... import Metrics
diff --git a/Code/MonoMutliViewClassifiers/Multiview/GetMultiviewDb.py b/Code/MonoMultiViewClassifiers/Multiview/GetMultiviewDb.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/GetMultiviewDb.py
rename to Code/MonoMultiViewClassifiers/Multiview/GetMultiviewDb.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/DecisionTree.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/DecisionTree.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/DecisionTree.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/DecisionTree.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/Kover.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/Kover.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/Kover.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/Kover.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/ModifiedMulticlass.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/ModifiedMulticlass.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/ModifiedMulticlass.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/ModifiedMulticlass.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/SubSampling.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/SubSampling.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/SubSampling.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/SubSampling.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Classifiers/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Mumbo.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Mumbo.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/Mumbo.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/Mumbo.py
index c79f4dec..b4cc4cb3 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/Mumbo.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/Mumbo.py
@@ -19,7 +19,7 @@ __status__ = "Prototype" # Production, Development, Prototype
def getBenchmark(benchmark, args=None):
allAlgos = [name for _, name, isPackage in
- pkgutil.iter_modules(['Multiview/Mumbo/Classifiers'])
+ pkgutil.iter_modules("./MonoMultiViewClassifiers/Multiview/Mumbo/Classifiers")
if not isPackage and not name in ["SubSampling", "ModifiedMulticlass", "Kover"]]
if args is None or args.MU_types != ['']:
benchmark["Multiview"]["Mumbo"] = allAlgos
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/__init__.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/analyzeResults.py b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/analyzeResults.py
similarity index 99%
rename from Code/MonoMutliViewClassifiers/Multiview/Mumbo/analyzeResults.py
rename to Code/MonoMultiViewClassifiers/Multiview/Mumbo/analyzeResults.py
index 192ca3fd..d06276eb 100644
--- a/Code/MonoMutliViewClassifiers/Multiview/Mumbo/analyzeResults.py
+++ b/Code/MonoMultiViewClassifiers/Multiview/Mumbo/analyzeResults.py
@@ -1,6 +1,5 @@
import numpy as np
import matplotlib
-matplotlib.use('Agg')
import matplotlib.pyplot as plt
import operator
from datetime import timedelta as hms
diff --git a/Code/MonoMultiViewClassifiers/Multiview/__init__.py b/Code/MonoMultiViewClassifiers/Multiview/__init__.py
new file mode 100644
index 00000000..55fdc627
--- /dev/null
+++ b/Code/MonoMultiViewClassifiers/Multiview/__init__.py
@@ -0,0 +1,8 @@
+from . import GetMultiviewDb#, ExecMultiview, Mumbo, Fusion
+# import pdb;pdb.set_trace()
+
+from . import ExecMultiview
+from . import Mumbo
+from . import Fusion
+
+__all__ = ['Fusion', 'Mumbo']
diff --git a/Code/MonoMutliViewClassifiers/Multiview/profile b/Code/MonoMultiViewClassifiers/Multiview/profile
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/profile
rename to Code/MonoMultiViewClassifiers/Multiview/profile
diff --git a/Code/MonoMutliViewClassifiers/Multiview/res b/Code/MonoMultiViewClassifiers/Multiview/res
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/res
rename to Code/MonoMultiViewClassifiers/Multiview/res
diff --git a/Code/MonoMutliViewClassifiers/Multiview/run.py b/Code/MonoMultiViewClassifiers/Multiview/run.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Multiview/run.py
rename to Code/MonoMultiViewClassifiers/Multiview/run.py
diff --git a/Code/MonoMutliViewClassifiers/ResultAnalysis.py b/Code/MonoMultiViewClassifiers/ResultAnalysis.py
similarity index 98%
rename from Code/MonoMutliViewClassifiers/ResultAnalysis.py
rename to Code/MonoMultiViewClassifiers/ResultAnalysis.py
index 19af768b..aa46938c 100644
--- a/Code/MonoMutliViewClassifiers/ResultAnalysis.py
+++ b/Code/MonoMultiViewClassifiers/ResultAnalysis.py
@@ -6,15 +6,15 @@ import logging
# Import third party modules
import matplotlib
-matplotlib.use('Agg')
+# matplotlib.use('Agg')
import matplotlib.pyplot as plt
import numpy as np
-from matplotlib import cm
+# from matplotlib import cm
import matplotlib as mpl
# Import own Modules
-import Metrics
-from utils.Transformations import signLabels
+# import Metrics
+# from utils.Transformations import signLabels
# Author-Info
__author__ = "Baptiste Bauvin"
diff --git a/Code/MonoMutliViewClassifiers/Versions.py b/Code/MonoMultiViewClassifiers/Versions.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/Versions.py
rename to Code/MonoMultiViewClassifiers/Versions.py
diff --git a/Code/MonoMutliViewClassifiers/__init__.py b/Code/MonoMultiViewClassifiers/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/__init__.py
rename to Code/MonoMultiViewClassifiers/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/temp_scm_fusion b/Code/MonoMultiViewClassifiers/temp_scm_fusion
similarity index 100%
rename from Code/MonoMutliViewClassifiers/temp_scm_fusion
rename to Code/MonoMultiViewClassifiers/temp_scm_fusion
diff --git a/Code/MonoMutliViewClassifiers/test.png b/Code/MonoMultiViewClassifiers/test.png
similarity index 100%
rename from Code/MonoMutliViewClassifiers/test.png
rename to Code/MonoMultiViewClassifiers/test.png
diff --git a/Code/MonoMutliViewClassifiers/utils/Dataset.py b/Code/MonoMultiViewClassifiers/utils/Dataset.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/utils/Dataset.py
rename to Code/MonoMultiViewClassifiers/utils/Dataset.py
diff --git a/Code/MonoMutliViewClassifiers/utils/HyperParameterSearch.py b/Code/MonoMultiViewClassifiers/utils/HyperParameterSearch.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/utils/HyperParameterSearch.py
rename to Code/MonoMultiViewClassifiers/utils/HyperParameterSearch.py
diff --git a/Code/MonoMutliViewClassifiers/utils/Transformations.py b/Code/MonoMultiViewClassifiers/utils/Transformations.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/utils/Transformations.py
rename to Code/MonoMultiViewClassifiers/utils/Transformations.py
diff --git a/Code/MonoMutliViewClassifiers/utils/__init__.py b/Code/MonoMultiViewClassifiers/utils/__init__.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/utils/__init__.py
rename to Code/MonoMultiViewClassifiers/utils/__init__.py
diff --git a/Code/MonoMutliViewClassifiers/utils/execution.py b/Code/MonoMultiViewClassifiers/utils/execution.py
similarity index 100%
rename from Code/MonoMutliViewClassifiers/utils/execution.py
rename to Code/MonoMultiViewClassifiers/utils/execution.py
diff --git a/Code/MonoMutliViewClassifiers/Multiview/__init__.py b/Code/MonoMutliViewClassifiers/Multiview/__init__.py
deleted file mode 100644
index c08e3796..00000000
--- a/Code/MonoMutliViewClassifiers/Multiview/__init__.py
+++ /dev/null
@@ -1,7 +0,0 @@
-from . import GetMultiviewDb, ExecMultiview, Mumbo, Fusion
-
-# from . import ExecMultiview
-# from . import Mumbo
-# from . import Fusion
-
-__all__ = ['Fusion', 'Mumbo']
diff --git a/Code/__init__.py b/Code/__init__.py
index 01da5837..f080b245 100644
--- a/Code/__init__.py
+++ b/Code/__init__.py
@@ -1 +1 @@
-from . import MonoMutliViewClassifiers, Tests, Exec
\ No newline at end of file
+from . import MonoMultiViewClassifiers, Tests, Exec
\ No newline at end of file
--
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